Hibiscus syriacus (Rose-of-Sharon): 120165895
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Entry
120165895 CDS
T09559
Name
(RefSeq) helicase-like transcription factor CHR28 isoform X1
KO
K22651
E3 ubiquitin-protein ligase RNF4 [EC:
2.3.2.27
]
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hsyr04121
]
120165895
Enzymes [BR:
hsyr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120165895
Ubiquitin system [BR:
hsyr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
120165895
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C3HC4_2
zf-RING_2
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_3
zf-RING_5
zf-C3HC4_4
zf-rbx1
zf-RING_10
Zn_ribbon_6
Prok-RING_4
Rtf2
zf-RING_4
zf-ANAPC11
zf-Nse
zf-RING_6
TerY_C
TRAF3_RING
zf-RING_11
Sina_RING
Zn_ribbon_RlmA
zf-P11
Motif
Other DBs
NCBI-GeneID:
120165895
NCBI-ProteinID:
XP_039031255
LinkDB
All DBs
Position
Unknown
AA seq
209 aa
AA seq
DB search
MNTLEVRGPSLRGYRRRKAMLDLNVPPSEIRELEGTSQQAGYGEQTSQSVQLGPPATIDV
EAIDDDVIESSARAFAEAQNNSRRNRGRTVVDVDSVGVAHIPPLLGWRSTDNNQNRARRL
SPSPSVMNLECSTQSVVEEIITPQSPRKEPTFNCPICMGPLTEEMSTRCGHIFCKRCIKA
AIAFQPRCPTCRKKVAVRELIRVFLPSAS
NT seq
630 nt
NT seq
+upstream
nt +downstream
nt
atgaacactcttgaagtgagggggccttctcttagagggtatcgacggagaaaggcaatg
ctcgatctgaatgttccacccagtgaaatccgagaactggagggtacttcccaacaggct
gggtatggggaacaaactagccaatccgtacagcttggaccacctgcaactattgatgtt
gaggctattgatgatgatgtaattgaatcttctgctagagcttttgcagaggctcagaac
aattcaaggaggaaccgtggaaggactgttgttgatgtagattcagttggtgtagctcac
atccctccccttctaggctggaggtcaactgataataatcagaatagggcccgaagactt
tctccgagcccaagcgttatgaacttggaatgttcaacacagtcggtggttgaggaaatc
ataacaccacagtcgcctcgaaaggaaccaaccttcaattgtccaatttgtatggggccg
ttaacagaggagatgtcgacgagatgtgggcatatattctgcaagagatgcattaaagct
gcaatagcttttcagccaagatgcccaacttgcaggaaaaaagtcgctgtgagagaacta
attagggtcttccttccatcggcctcttga
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