Hibiscus syriacus (Rose-of-Sharon): 120166234
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Entry
120166234 CDS
T09559
Name
(RefSeq) probable cyclic nucleotide-gated ion channel 5
KO
K05391
cyclic nucleotide gated channel, plant
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
120166234
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
hsyr04040
]
120166234
Ion channels [BR:
hsyr04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
120166234
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Ion_trans_2
IQ
Motif
Other DBs
NCBI-GeneID:
120166234
NCBI-ProteinID:
XP_039031473
LinkDB
All DBs
Position
Unknown
AA seq
740 aa
AA seq
DB search
MFDSGYKAQYMSGQREKFVRLDDLDSRLSSPSAAGLKNCGFNIEGLGRSSHSNKTTSRSF
KRGIKKGSEGLKSIGRSLGFGVSRAVFPEDLKVSEKKIFDPQDKFLLLCNKLFFISCILA
VSVDPLFFYLPVINDPEKCLTIDKKLAVTATTLRTIIDVFYLIRMALQFRTAYIAPSSRV
FGRGELVIDPAKIAKRYLQQYFVIDFLAVLPLPQIVVWRFLHNPNGSDVLATEQALFFIV
LFQYVPRFLRIIPLTSEMKRTAGVFAETAWAGAAYYLLLYMLCSHIVGAFWYWVAVERND
TCWQNACKDVGIGNCTKTFLYCGHQHGEGYNKWTDIRDSVLEERCPADEDDNNPPFDFGI
FTQALSSGVVSSTKFFSKYCYCLWWGLQNLSTLGQGLQTSTYPGEVIFSIALAIFGLILF
ALLIGNMQTYLQSLTIRLEEMRIKRRDSEQWMHHRMLPQDLRERVRRYDQYKWLETRGVD
EESLVQSLPKDLRRDIKRHLCLALVRRVPLFESMDERLLDAICERLKPCLFTENTYIVRE
GDPVDEMLFIIRGRLESITTDGGRSGFFNHSLLKEGDFCGEELLTWALDPKTGANLPTST
RTAKALTEVEAFALTADELKFVAGQFRRLHSRQVQHTFRFHSQQWRTWAACFIQAAWRRY
SKRKSLEELRRKEEEEAEGSNGTRNNSGGSSYSIRATFLASKFAANALRGIHRNRIAKSA
KELVKLQKPPEPDFTAEDAD
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atgtttgattctggttataaagcccaatatatgagtggacaaagggagaagtttgtcagg
ttggatgacttggactctagattatcatcaccctctgctgcaggattgaaaaattgtggg
tttaacattgagggattaggccgttctagccattcaaacaagacaacatctcgatctttc
aagagagggatcaaaaaggggtctgaaggacttaagtcaattggtcgctcacttggattt
ggggtttctcgagcagtatttcctgaggatcttaaagtttcagagaagaaaatatttgat
cctcaggataaattcctcttgctatgcaataaattatttttcatatcatgtattctggca
gtatcagtagaccctctctttttttatcttccagttattaatgatcctgaaaagtgtctc
actattgataaaaaattagcagttacggcaacgactttgcgaacgattattgatgtcttt
tatcttatacgcatggctcttcagttccgtacggcttacattgcgccatcatctcgagtt
tttggacgaggtgaacttgtgattgatcctgcaaaaatagccaagcgatacttgcagcag
tatttcgtcattgattttcttgctgtacttccattaccacagattgttgtttggagattt
cttcacaatccaaatggttcagatgtactagcaacagaacaggccttgttttttattgtc
ttgtttcagtatgtccctcgatttctcagaattatacccttaacatcagaaatgaaaagg
acagcaggtgtctttgctgaaactgcttgggctggagctgcatattatttgctattatat
atgctttgtagtcatatagtaggggcattctggtactgggtggctgttgaacgaaatgat
acttgttggcagaatgcctgcaaggatgttggtattggtaattgcactaaaactttccta
tactgtgggcatcaacatggggaaggatataacaaatggactgatatcagagactccgtt
cttgaagaaaggtgcccagctgatgaggatgataataatcctccatttgattttggaatc
ttcacacaggctttgtcatctggtgttgtttcatcaacaaagttcttttccaaatactgc
tactgtttatggtggggtctacagaatttgagcacccttggccagggactacaaactagc
acctatcctggtgaggttatattctccatagctcttgccattttcggactcatcctcttt
gcacttctgattggaaacatgcagacctatcttcagtcactcactattcggctagaagaa
atgaggattaaaaggcgtgattcagagcagtggatgcatcatcgtatgcttccgcaggac
ctgagggaacgagtgaggcgttatgaccagtacaagtggttggaaacacgcggtgttgat
gaagagagcttggttcaaagccttccaaaggatctgaggagagatattaagaggcacctc
tgtttggctttggttagaagggttcctctgtttgagagcatggatgagagattgcttgat
gccatttgtgaacggcttaaaccatgcctgtttactgagaacacttacatagtccgagag
ggggatcctgttgatgagatgcttttcattattcgtggccgccttgagagtataacaaca
gatggtggaaggagcggatttttcaaccacagtttgcttaaagagggagatttctgtgga
gaggaacttctaacttgggcattggatcccaaaaccggcgccaaccttccaacatctact
cggacagcgaaggctttgactgaggtcgaagcttttgcccttacagctgatgagttaaaa
tttgttgccggtcaattcaggcgtcttcacagtagacaggtacaacatacgttccgtttt
cattcacagcagtggaggacatgggcagcttgctttatccaagcggcatggcggcgttat
tcaaagaggaagagtctggaggagcttcgtcggaaggaagaagaggaagcagaaggatca
aatggaacccgcaacaacagtggtggaagctcgtacagcatccgagccactttcttagct
tccaagtttgctgcaaatgcacttcgtggcattcaccggaatcggattgctaagagtgca
aaggagttggtgaaactacaaaagcctcctgagcctgatttcactgcagaagacgctgat
tga
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