KEGG   Hibiscus syriacus (Rose-of-Sharon): 120166293
Entry
120166293         CDS       T09559                                 
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit A-like
  KO
K07466  replication factor A1
Organism
hsyr  Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr03030  DNA replication
hsyr03420  Nucleotide excision repair
hsyr03430  Mismatch repair
hsyr03440  Homologous recombination
hsyr03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:hsyr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    120166293
   03420 Nucleotide excision repair
    120166293
   03430 Mismatch repair
    120166293
   03440 Homologous recombination
    120166293
   03460 Fanconi anemia pathway
    120166293
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:hsyr03000]
    120166293
   03032 DNA replication proteins [BR:hsyr03032]
    120166293
   03400 DNA repair and recombination proteins [BR:hsyr03400]
    120166293
Transcription factors [BR:hsyr03000]
 Eukaryotic type
  Zinc finger
   Cys2His2 others
    120166293
DNA replication proteins [BR:hsyr03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RPA (replication protein A)
    120166293
DNA repair and recombination proteins [BR:hsyr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    RPA (replication factor A)
     120166293
   MMR (mismatch excision repair)
     120166293
  DSBR (double strand breaks repair)
   HR (homologous recombination)
     120166293
SSDB
Motif
Pfam: REPA_OB_2 RRM_1
Other DBs
NCBI-GeneID: 120166293
NCBI-ProteinID: XP_039031515
LinkDB
Position
Unknown
AA seq 321 aa
MRGKSGSDSCKDVDVVTVLPACSTSTTADSMAALQNEQLILVLQYRTRLNVNKQPPDRKA
VRRLHSTSDVIIIVLNLETIIQEYEIIRNPKVITGSEPETNKSLPNNNLEPSVRSTNNKY
SAQVPSGNDQSFWFTIQPAYQPPPNYKTQGTIMMNEAPTHIIPIPALNPYQGHCAIKARL
TAKGDLRHNKAREDGKGSLKLAQKNFNHLRNEWEIFLESNSTVEPCADEDGSILSQQFFR
PISEIESAKNNSILDVIGIVISVNPSFPICGKKVRCSTSQSKHRLFVGNISRSWGEEDLR
KVVSKVGTEVTGLELVKDVKN
NT seq 966 nt   +upstreamnt  +downstreamnt
atgagagggaaaagtggctctgatagttgcaaagatgtagacgtggtgactgttcttcct
gcatgttccacttccacaacagcagattccatggctgctttgcagaatgagcagcttatt
cttgtactacagtacagaacaaggctaaatgttaacaaacaaccaccggatcggaaagct
gtgagaagattgcattcaacctcagacgtgattattattgtgctcaatttggagactata
attcaagagtatgaaattatcaggaatccaaaagttattacaggttctgaaccggaaact
aacaagtcattgcctaataacaacttggagccttctgtgaggtccaccaataataaatat
agcgctcaagtcccttctggtaatgaccagagtttctggttcactattcaacctgcatat
cagccgcccccaaattacaaaacacaaggcacaataatgatgaatgaggcaccaacacac
attattcccattcctgctttgaatccttatcagggacattgtgctattaaagctcgattg
actgcaaaaggtgatcttcgtcacaacaaggctagggaagatgggaagggtagcttgaaa
cttgcacaaaagaatttcaaccatttgaggaacgagtgggagatattcttggagtcaaat
tcaaccgtggagccttgcgctgatgaagatggctctattctgagtcaacagttcttcaga
cctatcagtgaaattgagagtgctaaaaacaattctatacttgatgttatcggtattgtg
atatctgtaaatccttcatttcctatttgtggtaaaaaagttaggtgttctacttcccaa
tcaaagcatcgattgtttgttggtaatatttcgagaagctggggggaggaagacctaagg
aaggttgtgtcaaaggttggtactgaagttactggtttagaattagtgaaggatgtgaag
aactaa

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