Hibiscus syriacus (Rose-of-Sharon): 120166786
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Entry
120166786 CDS
T09559
Name
(RefSeq) cyclic nucleotide-gated ion channel 2-like
KO
K05391
cyclic nucleotide gated channel, plant
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
120166786
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
hsyr04040
]
120166786
Ion channels [BR:
hsyr04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
120166786
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Ortholog
Paralog
GFIT
Motif
Pfam:
cNMP_binding
Ion_trans
DUF3382
Ion_trans_2
TMEMspv1-c74-12
DUF308
Motif
Other DBs
NCBI-GeneID:
120166786
NCBI-ProteinID:
XP_039031917
LinkDB
All DBs
Position
Unknown
AA seq
715 aa
AA seq
DB search
MPSPSNFSLSRWFGLCQQRNTIPENSNGGGGGDINEENPISYTIECYACTQVGVPVFHST
SCDQAHPPEWEASAGSSLVPIQARTRAGQKKAQQAAAAANTRRRYGPFGRVLDPRTKRVQ
NWNRFFLLARGMALAVDPLFFYALSIGRGGSPCLYMDGGLAAIVTVLRTFVDAVHLFHLW
LQFRLAYVSRESLVVGCGKLVWDARAISSHYLRSLKGFWFDAFVILPVPQAVFWLVVPKL
IREEKIKLIMTIMLLIFLFQFLPKVYHSICLMRRMQKVTGYIFGTIWWGFGLNLIAYFIA
SHVAGGCWYVLAIQRVASCLRQQCARNAHCNLSLSCSEEVCYQFLFPAETVGNSCGGNST
KVVGKPLCLDVHGPFNYGIYQLALPVVSSNSASVKILYPIFWGLMTLSTFGNDLEPTSHW
LEVMFSIFIVLAGLMLFTLLIGNIQVFLHAVMAKKRKMQLRCRDMEWWMKRRQLPSRLRQ
RVRHFERQKWTISGGEDEMELIKDLPEGLRRDIKRYLCLDLIKKVPLFQNLDDLILDNIC
DRVKPLVFSKDEKIIREGDPVQRMVFIVHGRIRRNQSLSKGMVATSFIEPGGFLGDELLS
WCLRRPFMDRLPASSATFVCIESIEAFGLEANHLKYITDHFRYKFANERLKRTARYYSSN
WRTWAAVNIQLGWRRYRRRTGGPMVSVAENGNSSDRRLLQYAAMFMSIRPHDHLE
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgccttctccgtccaacttctccctctcaaggtggtttggactttgtcagcaacggaac
acaatcccagagaattctaacggcggcggcggcggtgacatcaacgaagaaaacccaatt
tcctacactatagaatgctacgcttgcactcaagtcggtgttccagttttccactccacc
agctgcgaccaagctcaccctcccgaatgggaagcctccgccggctcctcactcgttccc
attcaggctcgtactagggcgggtcagaagaaggctcaacaagccgccgccgcggccaat
acccggcgacgttacggcccgtttggacgggttcttgatccgagaacgaagcgggtgcaa
aactggaaccggttttttctgttggctcgtggaatggccttagctgttgatcctttgttc
ttttatgctttgtcgataggcagaggcggctcgccgtgtctgtacatggatggcggattg
gccgccatagtaaccgtacttcgcacgttcgtggacgcggtgcatttgttccatctatgg
cttcagttcaggctggcgtacgtgtcgagggagtcgctcgtcgtgggttgcggtaaactc
gtgtgggacgcacgtgccatctcctctcattaccttcgttccctcaaaggtttctggttt
gatgccttcgtcatcctgccagttcctcaggctgtattttggttagttgtgccaaaacta
ataagggaagagaagatcaagcttataatgaccataatgttgttaattttcttgttccaa
ttcctcccaaaggtttaccacagcatttgcttaatgagaaggatgcaaaaggtcactggt
tacatctttggcaccatttggtggggctttggccttaacctcattgcctacttcattgct
tctcatgttgctggagggtgctggtatgtccttgcgatacagcgggttgcctcgtgtctc
aggcaacaatgcgcgagaaacgctcactgcaacctttcgttgtcgtgctcggaggaggtg
tgctaccagtttttatttccggctgaaacggtaggaaattcttgcggtggtaactcgacc
aaagttgtagggaaacctttatgtttagacgttcatggaccattcaattatgggatttat
cagttggctctccccgttgtttctagcaactctgcctctgttaagatcctttatcccata
ttttggggattaatgactctcagcacctttgggaatgatcttgaaccaacaagtcactgg
ttagaagtgatgttcagtatcttcattgtgcttgctggattgatgctcttcactttactg
attggaaacatccaggttttcttgcatgctgtaatggccaaaaagagaaaaatgcagcta
agatgtcgagacatggaatggtggatgaaacgccggcagttaccgtcgcgtttgagacag
cgagtccgccacttcgaacgtcaaaaatggacaatatcgggtggagaagacgaaatggaa
ctgatcaaagacttacccgaaggcctccggagagacatcaagcgctacctttgccttgac
cttatcaagaaggttcctttgttccaaaacttggatgaccttattctcgataacatctgt
gatcgagttaagccactcgtattctctaaagacgaaaagataatcagagaaggagatcca
gtgcagagaatggtgtttattgttcacggacgaataagacgtaaccaaagcctcagcaaa
ggcatggtcgccaccagttttatcgagccgggaggcttcctgggtgatgagttgttgtca
tggtgtcttcgcagaccatttatggatcgtcttcctgcctcgtctgcaacattcgtatgc
atagagtcgattgaagcgttcggtctcgaggcaaaccatctcaaatacatcacggatcac
ttcaggtacaagtttgccaacgagaggcttaagagaacagccagatactattcatcgaac
tggcgaacgtgggcagccgtgaatatacaactcggttggcggcgttacaggaggaggact
ggaggtccgatggtttctgttgccgaaaacggaaacagcagtgaccgacgattgctacaa
tatgctgccatgtttatgtcaataagaccacatgatcatctagaataa
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