Hibiscus syriacus (Rose-of-Sharon): 120167479
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Entry
120167479 CDS
T09559
Name
(RefSeq) oligouridylate-binding protein 1B-like
KO
K13201
nucleolysin TIA-1/TIAR
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsyr03019
]
120167479
03041 Spliceosome [BR:
hsyr03041
]
120167479
Messenger RNA biogenesis [BR:
hsyr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
120167479
Spliceosome [BR:
hsyr03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
120167479
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_7
RRM_10
Motif
Other DBs
NCBI-GeneID:
120167479
NCBI-ProteinID:
XP_039032415
LinkDB
All DBs
Position
Unknown
AA seq
420 aa
AA seq
DB search
MQYQRIKQQQQALMQQALLQQQSLYHPGILTPPQIEPIPSGNLPPGFDPSTCRSVYVGNI
HTQVTEPLLQEVFASTGPVESCKLVRKDKSSYGFVHYFDRRSATLAILSLNGRHLFGQPI
KVNWAYASGQREDTSGHFNIFVGDLSPEVTDAMLFACFSVYPSCSDARVMWDQKTGRSRG
YGFVSFRNQKEAQSAINYLSGKWLGSRQIRCNWATKGATSSDDKQSSDVKSVVELTNDSS
EDGKGTTNTEAPENNPQYTTVYVGNLAPEVTQLELHHHFHALGAGVIEEVRVQRDKGFGF
VRYSTHAEAALAIQMGNTQSFLFGKQIKCSWGSKPTPPGTSSNPLPPPAAPLHGLSAADL
LAYERQLAMSKMGIHALMQPQGQHPLKPGAMGVGAAGGSQAIYDGGFQNVAAAQQLMYYQ
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgcagtaccagaggataaagcaacagcaacaagccttgatgcaacaagctcttcttcaa
caacagtctctttatcatcctggcatcttaactcctcctcagatagagccaattccaagt
ggaaatctgcctcctggttttgatccaagtacttgccgcagtgtgtatgtgggaaacata
catacacaggtgactgaaccactacttcaggaggtttttgcaagtactggtcctgttgaa
agttgcaagcttgtccgaaaggacaagtcatcatatggatttgtccactacttcgatcgt
agatcagctactcttgctatattgtctctgaatggaaggcacttgtttggacagcctatc
aaggtcaattgggcatatgccagtggtcagagagaagatacatcaggtcactttaacatt
tttgtcggggatctcagtcccgaagttactgatgcaatgctgtttgcctgcttttctgtc
taccccagttgttcggatgcaagggttatgtgggatcagaaaactggacgttcaagaggg
tatgggttcgtgtcattccgcaaccagaaggaagcacaaagtgcaattaattacttaagt
ggaaagtggcttggcagtcggcagatccgttgtaactgggcaacaaagggtgctaccagc
agtgatgacaagcagagctctgatgtcaaaagtgtggtggaactgaccaatgactcatct
gaggatggtaaagggacaacaaatactgaggctcctgagaataatcctcaatatactact
gtttacgtgggcaatcttgctccagaggtcacccaacttgaactccatcatcacttccat
gctctcggtgctggggtgattgaggaggttcgagttcagcgcgataaagggtttggcttt
gtgagatacagtacacatgctgaggcagctttggctattcagatggggaacactcagtca
ttcctatttggcaagcaaataaagtgctcttggggcagcaagcctacaccaccagggaca
agctctaatccacttcccccacccgcagcgcctttacacggcctttcagccgccgacctt
ttagcttatgagcggcagcttgccatgagcaaaatgggtattcatgccctaatgcaacct
caggggcaacatcctctcaagccgggagcaatgggagtgggtgccgctggaggaagccag
gctatatatgatggtggattccagaacgttgctgccgcccagcagctgatgtactatcag
taa
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