Hibiscus syriacus (Rose-of-Sharon): 120167703
Help
Entry
120167703 CDS
T09559
Name
(RefSeq) probable pectate lyase 8
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr00040
Pentose and glucuronate interconversions
hsyr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
120167703
Enzymes [BR:
hsyr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
120167703
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
120167703
NCBI-ProteinID:
XP_039032570
LinkDB
All DBs
Position
Unknown
AA seq
453 aa
AA seq
DB search
MILRKRESAMGISQRFFSLFTLLLIILFVCVSASAQKTELNSRLAEGNKLQDLKNSSMAD
KLDDGNRRNKHAVENPEEIASMVDMSIRNSTDRRNLGYFSCGTGNPIDDCWRCDRLWYHR
RRRLANCGIGFGRNAIGGRDGRYYVVTDSGDDDPVNPKPGTLRHAVIQDRPLWIVFKRDM
VITLKQELIMNSFKTIDARGVNVHIAYGACITIQFVTNIIIHGLHIHDCKPTGNAMVRSS
PSHYGWRTMADGDGISIFGASHIWIDHNSLSNCADGLIDAIMGSTAITISNNYFTHHNEV
MLLGHSDSYMRDKQMQVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSAD
PTINSQGNRFLAPNNPFAKEVTKREGGWNGEWKQWNWRSEGDLLLNGAYFTPSGVGAAAS
YARASSLGAKSSTLVGIITSNAGALACRNGRMC
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgatattgagaaagagagaatcagcaatggggatttctcagagattcttctccttgttt
acattgctactcattatattgttcgtttgtgtcagtgcctcagcccagaaaacagagctg
aattcgaggcttgctgagggaaacaaattacaggatttaaagaactcatcaatggcagac
aagttggatgatgggaaccggagaaataagcatgcagtggagaatccagaggaaattgct
tcaatggttgatatgagcataagaaatagtacagataggagaaacttgggatatttctcg
tgtggaacagggaatccgattgatgactgttggcggtgtgaccgtctatggtaccatagg
cgaagacgccttgcaaactgtggcatcgggtttggacgcaatgccatcggtggtcgtgat
ggaaggtactatgttgtgactgactctggtgatgacgatcctgtgaacccaaaaccaggg
accctacgtcatgctgttatccaagacaggcctctttggatcgtcttcaagcgtgacatg
gtgatcacattaaagcaggagctgataatgaacagttttaagacgatcgatgctcgcggt
gtcaacgtacatatcgcatacggtgcatgcatcaccatccagtttgtcaccaacattatc
atccatggactccacattcatgactgcaagcccacagggaacgccatggttcgaagctcc
ccgtctcattatggatggagaaccatggcggacggggatggtatttcgattttcggcgcg
agccatatctggatcgaccacaactcgctgtctaattgtgctgatggacttatcgatgca
ataatgggatccacagcaattacaatctcgaacaactacttcacccatcacaatgaggtt
atgctgttgggacatagtgactcttacatgagagacaagcagatgcaagtcaccattgct
tataaccacttcggcgagggtcttatccagcgaatgccgaggtgtcgacacgggtatttc
catgtagtgaacaatgactatacacattgggaaatgtatgctatcggcggaagcgctgat
cccaccattaatagccaaggcaaccgtttccttgcccctaataacccctttgccaaggag
gttacaaagagagaaggcggatggaatggtgaatggaaacaatggaattggaggtcggaa
ggagatctgttgttaaacggagcatatttcactccatcaggtgtcggagcagccgctagc
tatgccagggcctcgagcttaggtgccaaatcgtctaccttggtcggcatcattacttcg
aatgcaggcgcccttgcctgccgcaatggccgcatgtgttaa
DBGET
integrated database retrieval system
