KEGG   Hibiscus syriacus (Rose-of-Sharon): 120167810
Entry
120167810         CDS       T09559                                 
Name
(RefSeq) sm-like protein LSM1B
  KO
K12620  U6 snRNA-associated Sm-like protein LSm1
Organism
hsyr  Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:hsyr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    120167810
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hsyr03019]
    120167810
Messenger RNA biogenesis [BR:hsyr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     120167810
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     120167810
SSDB
Motif
Pfam: LSM Hfq
Other DBs
NCBI-GeneID: 120167810
NCBI-ProteinID: XP_039032636
LinkDB
Position
Unknown
AA seq 128 aa
MSWAGPDDIFLSTSLATYLDKKLLVLLRDGRKLLGLLHSFDQFANVVLEGACERVIVGNL
YCDIPLGLYVIRGENVVLIGELDLEKEELPPHMTAVSETEIKRAQKAEREATDLKGSMRK
RMEFLDFD
NT seq 387 nt   +upstreamnt  +downstreamnt
atgtcttgggctggccctgatgatatctttctctccacttctcttgcaacttatctcgac
aagaaactccttgtcttgctgagagatggccggaagcttttgggattactacattctttt
gatcaatttgctaatgttgttctagaaggagcttgtgaacgggttattgttggcaatttg
tactgtgatatcccgttaggtctctatgtaatccgtggagagaatgttgtcttaatagga
gagctggacttggagaaggaggagcttccaccacatatgactgctgtgtcggaaaccgag
ataaaaagggctcagaaagcagaaagggaagcaacagatctaaagggctccatgagaaaa
agaatggagttccttgattttgattaa

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