Hibiscus syriacus (Rose-of-Sharon): 120167892
Help
Entry
120167892 CDS
T09559
Name
(RefSeq) serine/arginine repetitive matrix protein 1-like isoform X1
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr03013
Nucleocytoplasmic transport
hsyr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
120167892
03015 mRNA surveillance pathway
120167892
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsyr03019
]
120167892
03041 Spliceosome [BR:
hsyr03041
]
120167892
Messenger RNA biogenesis [BR:
hsyr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
120167892
Spliceosome [BR:
hsyr03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
120167892
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PWI
Motif
Other DBs
NCBI-GeneID:
120167892
NCBI-ProteinID:
XP_039032708
LinkDB
All DBs
Position
Unknown
AA seq
883 aa
AA seq
DB search
MSGGFFRGTSADQDTRFSNKQAKLLKSQKFAPELEHLVDMTKVKMDVIRPWIATRVTELL
GFEDEVLINFICGLLDGKEVNGKEVQISLTGFMEKNTRKFMKELWILLLSAQNNASGVPQ
QFLDAKEEETRKKKEESDRIANEIQQKKDKESRELEQERSRKMAGDAGLDSSSKNMLPKG
SSVCPEEEKDTDQRNGVRRKSVSRSPCSTDRLPSPWRPHSRSVSRSFSNSRSYSDGKKKF
RSVSRSPQPRQSSISFDKTYPSPRKSPTRSRYSPRSSRSPARRRSPYSRQRSRSHSSRGS
PSPVRRRLHSPYQFKSPSPIRRRRSPSPIRRRRSPSPIRRRRSPSPIRRRRSPSPIRRRR
SPSPIRRLRSPSPIRRRRSPSPIRRRRSPSPIRRRRSPSPIRRRRSPSPIRRHRSPSPIR
RRRSPSPIRRRRSPSLVRHHRSPSDVHRMSRSPVRRKSPPPTHRRSPLPVRHRSPSPFRR
RSPSLVRQQRRRSSSTPRHRSSSPARRRSPASSRRPITPSQGKSSPYQSSSASPVQRRSS
PVGRFQKDRRSPLLFHGERQRMSGKLSPVSGSPSHLRKQSTSEDRRSSSLRDSPMRQCMQ
RIARDDSFSPEQKSRELKGQLDSKGRGGKNGASRIRHSPPLSEQRVSPSKVHTLERLTGI
QSTELRKDLEMKSERSSGKKVHLGTPDRHRAPALSQDSFQGEKQSSPHLGSGKRSNERSH
SRQNNMKDSDKLHKVETSPMSLEKIDHNNNGLDSGSEGSDNHKTKHKKKRKHKRSERCVV
TSDDDSSCDSEIEDRKEAKRRKEEKRLRKEEKRRHRNERRRRREERHVEKLKMKGQDIND
EDAARRKSHPSFDEEAESEQKKLEIELRIRALESLKAKKGVIG
NT seq
2652 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggcggatttttccggggtacttcggctgatcaagacactcggttctcgaataag
caggcgaagctactgaaatcgcagaaattcgctcccgaattggagcatctggttgatatg
acgaaggttaagatggacgttattagaccttggattgcgactcgggtaactgagcttctt
ggttttgaagatgaagttcttattaacttcatctgtggtcttctcgatggaaaggaggtt
aatggcaaggaagtccagatatccctcactggattcatggagaagaatactagaaagttt
atgaaagagctttggattctattgcttagtgcgcagaataatgcaagtggtgttcctcag
caattcttggacgccaaagaagaagaaactagaaagaaaaaggaagagtcagatcggata
gcaaatgagattcagcagaagaaagataaggaaagtagagaacttgaacaagagagatcg
aggaagatggctggtgatgcggggttggattcatcatcaaagaatatgctgccaaagggt
tcgagtgtatgccccgaggaagagaaagatactgaccaaaggaatggtgtcagaaggaag
agcgtttcccggtctccatgttcaactgatcgccttccgtccccttggaggccgcattct
cgttcagtcagcagatcattttctaattcaagaagctattcagatggcaaaaagaaattt
aggagtgtatctagatcacctcaacctcgacagagctccatttcctttgataagacgtat
ccttccccaagaaaatctccaactcgatctagatattcacctcgatcatcacgttctcct
gcaagacgacgatcaccttattctaggcaaaggtctagatctcattcatctcgaggatca
ccatctcctgtaaggcgtagattacattctccttatcaattcaaatcaccatcacccatt
cgacgtcgtagatcgccatcacccatccgacgacgtagatcgccgtcacccatccgacgt
cgtaggtcaccgtcacccatccgacgtcgtaggtcgccgtcacccatccgacgtcgtagg
tcgccgtcacccatccgacgtcttaggtcgccgtcacccatccgacgtcgtaggtcgccg
tcacccatccgacgtcgtaggtcgccgtcacccatccgacgtcgtaggtcgccgtcaccc
atccgacgtcgtaggtcgccgtcacccatccgacgtcacaggtcgccgtcacccatccga
cgtcgcagatcaccatctcctatccgacgtcgtagatctccatctcttgtccgtcatcat
agatctccatcagatgtgcatcgtatgtctcgttcacctgtgcgtcgcaaatctcctcct
ccaacacatcgaagatctccattacctgtgcgtcatagatctccgtcacccttccgacgc
aggtcaccctcccttgtgcgacagcagcgccgtagatcttcttcaacaccaagacatagg
tcgtcatcccctgcacgacgtagatcaccagcttccagccgtaggccaataactccttcc
cagggtaagtcttcaccttatcaatcaagttctgcctcccctgtgcaacgtagatcttcg
ccagttgggaggtttcagaaggatcgaaggtcacctttgctttttcatggagaaagacaa
cgaatgtctggaaagttgtctcctgtctctggatctccttcacatttgaggaagcagtct
accagtgaagataggaggtcatcaagtctgcgtgacagtcctatgagacaatgtatgcag
cgaatcgctcgtgatgatagcttcagtcctgaacagaaatcgagagaactgaaaggtcag
ctggacagtaaaggaagagggggtaaaaatggagccagcagaatcaggcattcaccacca
ttgagtgagcagagggtttctcctagtaaggttcatactcttgaacgattgacaggcatt
caatctacagaattgaggaaggaccttgaaatgaagagcgagaggtcctctggtaaaaag
gttcatctaggaactccagatcgacatagagcacctgctttgtctcaggactcatttcaa
ggtgagaagcaaagttcaccacacctgggatccgggaaaagatctaatgagaggagtcat
tctcgtcaaaataatatgaaggatagtgataaactccacaaagtggaaacctcaccgatg
tctcttgaaaagattgatcataataacaatggtctggattcaggttctgaagggagtgat
aatcacaaaactaagcataagaagaagcgaaagcataaaaggtccgagaggtgtgtagtt
acatcagacgatgattctagctgtgattctgaaattgaggataggaaagaagctaagagg
aggaaggaagaaaagagattaagaaaggaggagaagcgtagacatcgcaatgaacggcgt
cgcagaagagaagagagacatgtggagaagcttaaaatgaaaggtcaggacatcaatgac
gaggatgcagcgaggaggaagtctcatccaagttttgatgaagaggccgagagtgagcag
aagaagcttgaaattgagcttaggattcgggcacttgagtcactcaaagcaaagaaggga
gtcattggctga
DBGET
integrated database retrieval system
