Hibiscus syriacus (Rose-of-Sharon): 120169098
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Entry
120169098 CDS
T09559
Name
(RefSeq) pre-mRNA-processing protein 40A-like
KO
K12821
pre-mRNA-processing factor 40
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120169098
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hsyr03041
]
120169098
Spliceosome [BR:
hsyr03041
]
Complex A
U1 snRNP components
U1 related factors
120169098
Complex B
120169098
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
FF_RHG35_4th
Motif
Other DBs
NCBI-GeneID:
120169098
NCBI-ProteinID:
XP_039033249
LinkDB
All DBs
Position
Unknown
AA seq
1017 aa
AA seq
DB search
MANNSQPSSAQPHWPPSVGSMGPQSYGSPLSSQFRPVAPAQQGLHFIPGASQQFRPVGQV
PSPNAGMPAVQNSQMQFSQPMQQYPPRPNQPGLSTPSQQPVQVPYGQTNRPLTSEPPQAH
QSAPPLNSHMPGVGAPGMPPSSSYGFAPSSFGLPQNVSTPSQFQPISQVHASVAPVAMQP
WLSTGNQSVSLATPIQQTSQQPPLSSADAVANVASLTLQSSDWQEHTSADGRRYYYNKKT
RQSSWEKPLELMTPIERADASTVWKEFTTSEGRKYYYNKVTKQSKWTIPEELKLAREQAQ
AVASQGTPSGSGVPQAPVAAIGSAAEMPSTAISSSSNTLQDSSLASVMPVVNSSPNSASG
PTAIPVSQSATTDAPGAVSVSPLPAVPLGGSTVSVPSVNANTAVTRSLEPMATEDTDGAS
AQDIEEARKGMATGGKVNVTPVEEKILDDEPLVYANKLEAKNAFKSLLESANVQSDWTWE
QAMREIIIDKRYDALKTLGERKQAFNEYLGQRKKLEAEERRMRQKKAREEFTKMLEESKE
LTSSMRWSKAQSLFENDERFKTVERARDREDLFESYIVDLERKEREHAAEEKRRYIAEYR
KFLESCDFIKVNSQWRKVQDRLEDDERCSRLEKIDRLLIFQDCILDLEKEEEEKKKMQKE
QLRRAERKNRDAFRKLMEDHVADGTLTARTYWRDYCLKVKDLPQYLAVASNTSGSTPKDL
FEDVAEELEKQYHEDKTRIKDAMKSGKITMVCSWTFEDFKAAISEEVGSSLISDIKLKPV
YDELLERAKEKEEKEAKKRQRLADDFTKLLHTYKEITASSNWEDSKPLFEESQEYISIAE
ESSRREIFEEYIAHLQEKAKDKERKREEEKAKKERDREDKEKRKEKEREREREKGKDRTK
KDETDGENLDISDSYGHKEEKKKDREKDRKQHRKRHQSTADDESSDKDDREESKKSRRHG
SDRKKSRKHAHSPESESESRHKKHKRDRDGSRRNSGYEELEDGELGEDGVVPYLPLS
NT seq
3054 nt
NT seq
+upstream
nt +downstream
nt
atggccaacaattctcaaccatctagtgcccagccacattggcctccttcagttggatcc
atgggtcctcaaagttatggctctcccttatcttcacagtttcgaccagtggccccagcg
cagcaaggactacactttattccaggtgcttcccagcagttccgacctgttgggcaggtt
ccctctccaaatgctgggatgccagctgttcaaaattcgcagatgcagttttctcagcca
atgcagcagtatccaccccggccaaatcaacctggtctttctacgccttcacaacagcct
gtacaagtaccatatggtcaaacaaacaggcctcttacatctgaaccgccacaggcacat
caatctgctccccctttgaatagtcatatgcctggtgtaggagcccctggaatgccccca
tcttcatcatatggttttgcgccatcttcttttggccttcctcagaacgttagcacacct
tcccagtttcagcctatatctcaggtgcatgcatctgttgccccagttgccatgcaacct
tggttgtcaaccggaaatcagagtgtttcacttgctacacctatacagcagactagccaa
cagcctcccctttcttctgctgatgcggttgcaaatgttgctagccttactctgcaatct
tctgattggcaagagcatacatccgctgatggaagaagatactattacaacaaaaagaca
aggcaatctagttgggaaaagcctctggaactgatgacaccaatagagagagctgatgca
tccacggtttggaaggaattcactacttcggagggaagaaaatattattacaacaaggtt
acaaagcagtctaagtggacaatacctgaggaattgaagttagcacgtgagcaagctcag
gcggtagctagccaaggaactccatcaggctcaggagtgcctcaagctccagttgctgct
attggttctgcagctgagatgccttctacagctatttcttcgagctccaacactttgcag
gattcaagcctggcttcagttatgcctgttgttaattcttcacccaattcagcatctgga
ccaacggctattcctgtttcacaatctgctactacagatgcacctggggcagtgtctgtg
tcacctttacctgctgttcccttgggaggttccactgtttctgttccttctgtcaatgct
aacacagcagtcacaagaagcttggaacctatggcaactgaagacacagatggagcttct
gctcaagacattgaggaagcgagaaaggggatggcaactggtggaaaggttaatgtgact
ccagtagaagagaaaattctggatgatgagcctttagtatatgcaaataagctggaggca
aaaaatgctttcaaatctctccttgaatctgcaaatgtgcaatctgattggacgtgggag
caggcaatgagagaaataattattgacaaaaggtatgatgctctgaagacacttggtgag
cggaagcaagcctttaatgagtatttgggtcaaagaaaaaagttagaagccgaggaaagg
cgaatgagacagaagaaggctcgggaggagtttacaaaaatgctggaagagtctaaggaa
ctaacatcatccatgagatggagtaaagctcaaagtttgtttgaaaatgatgagcggttt
aagactgttgaacgtgccagagatcgggaagatctttttgaaagctatatagtggatctt
gagaggaaggaaagggaacatgctgcagaggaaaaaaggcgttatatagcagaatataga
aaatttctggaatcctgtgattttattaaggtaaacagccagtggaggaaagttcaagat
cgtttggaggatgatgaaagatgctctcgtcttgaaaaaattgatcggctgctcatattc
caggactgcattcttgacttagagaaggaagaagaggaaaaaaagaagatgcaaaaggaa
caattgagacgtgccgagcgcaaaaaccgtgatgcatttcgtaagctaatggaagatcat
gttgctgatggcactcttacagctagaacttattggcgagattattgtttgaaggtgaaa
gatttgcctcaatatcttgctgttgcatcaaacacatctggttcgacaccaaaagatttg
ttcgaggatgttgctgaagaattagaaaaacagtatcatgaagacaaaacccgtataaaa
gatgcaatgaagtcggggaagattaccatggtttgttcatggacattcgaagacttcaag
gctgctatttcagaagaagttggttcctcgctgatatcagatattaaattaaagcctgtg
tatgatgagttacttgagagagccaaggagaaggaggagaaagaggctaaaaaacgacaa
cgtctagctgatgacttcactaaactattgcatacctataaggagataacggcatcttct
aattgggaggattccaagccactttttgaagaaagtcaagaatacatatcaattgcagaa
gagagcagtaggagagagatttttgaggaatacattgcacacttacaggagaaagctaaa
gataaggagcgaaaacgagaggaggagaaggctaaaaaggagagagatagagaagataaa
gagaaaaggaaggagaaggaaagagaacgtgaaagggaaaagggtaaggatcgaactaaa
aaggatgagacagacggtgagaatttagatatatccgacagctatggccataaagaagag
aagaaaaaggacagggagaaagacaggaaacaacaccgtaaacgtcatcaaagcaccgct
gatgatgagagttcggacaaggatgatagagaggagtccaagaagtctcggagacatggc
agcgaccgtaagaaatcaagaaagcatgcccattcacctgaatccgagagtgaaagccgg
cataaaaagcacaagagagatcgtgatgggtcgcgtagaaacagtggttatgaggagctc
gaagatggtgaacttggtgaggatggtgtagttccatatttacctttatcatga
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integrated database retrieval system
