Hibiscus syriacus (Rose-of-Sharon): 120169112
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Entry
120169112 CDS
T09559
Name
(RefSeq) replication factor C subunit 4-like
KO
K10755
replication factor C subunit 2/4
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr03030
DNA replication
hsyr03410
Base excision repair
hsyr03420
Nucleotide excision repair
hsyr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
120169112
03410 Base excision repair
120169112
03420 Nucleotide excision repair
120169112
03430 Mismatch repair
120169112
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hsyr03032
]
120169112
03036 Chromosome and associated proteins [BR:
hsyr03036
]
120169112
03400 DNA repair and recombination proteins [BR:
hsyr03400
]
120169112
DNA replication proteins [BR:
hsyr03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
120169112
DNA Replication Termination Factors
ELG1-RFC complex
120169112
Chromosome and associated proteins [BR:
hsyr03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
120169112
DNA repair and recombination proteins [BR:
hsyr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
120169112
Check point factors
HRAD17(Rad24)-RFC complex
120169112
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
RCF1-5-like_lid
AAA_22
Rad17
RuvB_N
Mg_chelatase
AAA_16
AAA_11
AAA_5
AAA_14
SLFN-g3_helicase
ResIII
AAA_assoc_2
AAA_24
nSTAND3
AAA_2
PhoH
AAA_25
AAA_28
AAA_7
AAA_19
DNAX_ATPase_lid
T2SSE
AAA_30
RNA_helicase
Parvo_NS1
bpMoxR
NPHP3_N
DUF815
IstB_IS21
TIP49
AAA_18
NB-ARC
Motif
Other DBs
NCBI-GeneID:
120169112
NCBI-ProteinID:
XP_039033263
LinkDB
All DBs
Position
Unknown
AA seq
342 aa
AA seq
DB search
MAPVLQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETANCPHMLFYGPPGTGKTTTAL
AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGSGQRAGGYPCPPFKIII
LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEIMS
SRILHICDQEGLNLDSEALSTLSSISQGDLRRAITYLQGAARLFGSLISSSDLISVSGVI
PQEVVEALYVACKSGNFDLANKEVLNVIAEGYLVSQMISQLFNVVVEADDVPDEQKARIC
KSLAEADKRLVDGADEYLQLLDVASNTMRALHNMPQEFSFET
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atggcgccagtattgcagagctcccaaccttgggttgaaaaatatcggccaaagcaagtg
aaagatgtggcgcatcaagacgaggttgttcgagttctcaccaacaccctcgagaccgcc
aattgcccgcatatgctcttttacggtcctcctggaactggaaaaacaactaccgctctc
gccatcgcccatcagctatttggacctgaactctacaaatctagggtgctggagctaaat
gcaagtgacgaccgtgggatcaatgttgttcgcacaaagatcaaagattttgctgctgtt
gctgtagggtctggccagcgtgctgggggttatccttgcccaccgttcaagataattatt
cttgatgaagcagattcaatgactgaagatgctcagaatgctttgagacgtaccatggaa
acttactcaaaagttacacgattctttttcatatgcaactacataagcaggatcatagag
ccacttgcttcaagatgtgccaagttcagattcaagccactttcagaagaaataatgagc
agtcgtatattgcacatttgtgatcaagaaggcctaaatttagattcagaggcactttca
acattaagttccatttcacaaggtgatcttcgtcgggctattacatacttgcagggagct
gcacgcttatttggatcattgatttcctccagcgacctaatcagtgtgtctggggttata
cctcaagaagttgtggaggcgctttatgttgcatgcaaaagtggtaactttgatttggca
aacaaggaagtccttaatgtaattgcagaaggttatctagtttctcagatgatatctcag
ttatttaatgtggttgttgaggcagatgatgtaccagatgaacagaaagctagaatttgc
aagagtttggctgaagcagataagcgtctggttgatggcgcggatgagtacttgcagctg
ctggatgtggccagcaacacaatgcgtgctttgcataacatgccgcaagaattctctttt
gaaacttag
DBGET
integrated database retrieval system
