Hibiscus syriacus (Rose-of-Sharon): 120169404
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Entry
120169404 CDS
T09559
Name
(RefSeq) protein ANTHESIS POMOTING FACTOR 1-like
KO
K14962
COMPASS component SWD2
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
120169404
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsyr03019
]
120169404
03036 Chromosome and associated proteins [BR:
hsyr03036
]
120169404
Messenger RNA biogenesis [BR:
hsyr03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
120169404
Chromosome and associated proteins [BR:
hsyr03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
COMPASS/SET1 complex
120169404
COMPASS/SET1 complex (yeast)
120169404
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40_CDC20-Fz
WD40
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
Beta-prop_CAF1B_HIR1
EIF3I
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR75_1st
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_IFT122_1st
Beta-prop_TEP1_C
Beta-prop_SPT8
WD40_RFWD3
WD40_MABP1-WDR62_1st
Beta-prop_NUP159_NUP214
WDR90_beta-prop_4th
Beta-prop_DCAF12
PQQ_3
Beta-prop_Nup120_160
WD_LRWD1
Beta-prop_NWD2_C
Beta-prop_SCAP
YonK
Methyltransf_13
SUKH_6
Motif
Other DBs
NCBI-GeneID:
120169404
NCBI-ProteinID:
XP_039033473
LinkDB
All DBs
Position
Unknown
AA seq
343 aa
AA seq
DB search
MATTMSITELDDETVRSMSIGAVFSDFGGKISSLDFHRKDDLLVTASEDDSVRLYDIANA
TLIKTTYHKKHGADRICFTHHPNSVICSTRHNLESTGEALRYLSMYDNRCLRYFKGHKER
VVSLCMSPINDSFMSGSLDHSVRIWDLRVNACQGILHLRGRPTVAYDQQGLVFAVAMEGG
AIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKRC
GFSLEPSLNTTIEATITPDGQYVISGSGDGTLHAWNINMRNEVVAWNSHIGVAACLKWAP
RRAMFVAASTVLTFWIPNNNSKPAAETGSTNVQAGAQSEQIGQ
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgacgatgtcaattacagagcttgacgacgaaacagtgcgcagcatgtcgatt
ggcgcagttttctcagacttcggaggaaagataagttcacttgacttccatcgaaaggat
gatctattggtgacagccagtgaggacgattcagttcgcctttacgacattgccaatgct
acgttgataaagacgacatatcataagaaacatggcgcggatcgaatatgtttcacacat
catcctaattctgttatatgctctacaagacacaatttggaatcgactggagaagcccta
cggtatctttctatgtatgataaccgatgtcttcgctacttcaaaggacacaaagagagg
gttgtttccctctgcatgtctccgataaatgatagcttcatgtcaggttctcttgatcac
agtgtcaggatttgggatctacgtgtaaatgcctgtcagggaattttacacctacgtggt
agacctactgtagcatatgaccaacaaggccttgtctttgctgtggctatggaaggaggg
gctattaaattgtttgattcacgctcctatgacaagggcccgttcgatacatttttagtt
ggtggagacacagctgaggtttgcgatatcaaattcagcaatgatggcaaatcgatgcta
ttgacaactacaaataacaacatatatgttcttgatgcatatggaggagagaagcggtgt
gggttcagtttagaaccatctctcaatacaactatagaggcaaccattactccggatggt
cagtatgtaatctcagggtcaggggatggaaccttgcatgcctggaatatcaacatgcgc
aatgaggtagtcgcatggaacagtcacataggagttgcagcttgcttgaagtgggctccc
cgtagggccatgttcgttgctgcatcaaccgttcttacattttggatacctaacaacaat
tcaaaaccagctgcagagaccggttccaccaatgtacaagctggggcacaatccgaacaa
atcggtcaataa
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integrated database retrieval system
