Hibiscus syriacus (Rose-of-Sharon): 120169716
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Entry
120169716 CDS
T09559
Name
(RefSeq) RNA-binding protein 39-like isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hsyr03041
]
120169716
Spliceosome [BR:
hsyr03041
]
Common components
Common spliceosomal components
General mRNP proteins
120169716
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
RRM_7
Motif
Other DBs
NCBI-GeneID:
120169716
NCBI-ProteinID:
XP_039033764
LinkDB
All DBs
Position
Unknown
AA seq
588 aa
AA seq
DB search
MDFDEYEYLEKTVEEQEDPKKKKDGGSGEKSERSYRKRGERREDGDEIKSSRKKSRGSRD
EDDEERRDRDKERHRRSRDEDGEERRDRDKERHRSSRDREREKDRDPERSSREREMERGR
ERRDRDKEKEKDRERREREREREEERRERSSSRSRRHEREEERERERERRERSSSRSRRH
ESDRERDREREIDTRDSRRFKDKKEVVEPEADPERDQRTVFAYQMPLKATERDVYEFFSK
AGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLV
QSNTSGAGAGSVAGPYGAVDRKLYVGNLHFNMTEMQLRQIFEPFGPVELVQLPLDLETGQ
CKGFGFVQFAQLEHAKAAQGALNGKLEIAGRTIKVSSVTDHVGTQDPAAKSADFDDDEGA
GLALNAQSRALLMQKLDRSGIATSITSSLGVPLLNGSAPNPHAVTLPVNGQAAYPAPVLP
PIMCATPLDPIGQPSECLLLKNMFDPATETEPDFDMEIKEDVEEECSKYGRVKHIYVDKN
SAGCVYLRFDSVAAAGNAQRAMHMRWFAGRSIAALFMQPHEYGARFKE
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atggatttcgacgagtacgagtatttggaaaagaccgtcgaggagcaggaagatccgaag
aagaagaaagacggagggtcgggagagaagagtgaaagaagctacaggaagagaggagag
agaagagaggatggtgatgaaatcaagagcagcagaaagaaatcgagaggcagccgcgac
gaggacgacgaggagaggcgagatcgtgataaggaacgccatagaaggagccgcgatgag
gacggtgaggagaggcgagaccgtgataaggaacgccatagaagcagccgcgatagggag
agagagaaggatagggacccagagaggagcagtagagagagggaaatggaaagggggaga
gagaggagagatagggataaggagaaagagaaggatagggagaggagggaaagggaaagg
gaaagggaggaagaaaggagagagagaagcagtagcaggtcgagaaggcacgaaagggag
gaagaacgggagagggagagggagaggagagagagaagcagtagcaggtcaagaaggcac
gagagtgatcgtgaacgagacagggaacgtgaaattgacaccagagacagcaggagattt
aaagataagaaagaagtagtggagcccgaagctgatcctgagagagaccagagaactgtt
tttgcttaccagatgcctctaaaagcaactgagagagatgtctatgaattcttctcaaaa
gcgggcaaggtgagggatgttcggttgattatggataggaattcaagacgatcaaaggga
gttgggtatattgagttttatgatgtgatgtctgtgcccatggccatagcattatctggt
cagcttcttcttggtcaacctgtgatggttaaaccttcagaggctgaaaagaatcttgtt
cagtcaaatacttcaggtgcaggtgctggtagtgttgctgggccatatggggctgttgat
agaaaattgtatgttggaaacttgcacttcaatatgacagaaatgcagcttagacagata
tttgaaccttttggtcccgtggagcttgtacaactaccacttgaccttgaaactgggcag
tgcaaaggttttgggtttgttcagtttgctcaacttgaacatgcaaaagcagctcaaggt
gcattgaatggcaaactggaaattgctggtcgaaccattaaggtttcatctgttactgat
catgttggcacccaagatcctgcagcaaaatctgctgactttgatgatgatgagggtgct
ggtttggctttgaatgctcaatcaagagcattgcttatgcagaaactggatcgctctggt
attgccacaagtattacgagctcccttggagtaccccttcttaatgggtcagctcctaat
ccacacgctgttacgctacctgtcaatggccaagctgcatatccagcaccagttcttcct
ccaatcatgtgtgctacaccccttgatcctattggacaacccagtgagtgtttgttgttg
aagaatatgtttgatcctgcaactgagactgaacctgattttgatatggaaattaaagag
gatgtagaagaagaatgcagcaaatatggcagggtgaagcatatatatgtggacaaaaac
agcgctggctgtgtctatcttcgatttgattccgtagcagcagcaggtaatgctcaacgt
gccatgcacatgagatggtttgcaggtcgctcaatagcagccttattcatgcaaccccac
gagtatggagcgaggtttaaagaatga
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