Hibiscus syriacus (Rose-of-Sharon): 120169870
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Entry
120169870 CDS
T09559
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr00040
Pentose and glucuronate interconversions
hsyr01100
Metabolic pathways
Module
hsyr_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
120169870
Enzymes [BR:
hsyr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
120169870
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Paralog
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
120169870
NCBI-ProteinID:
XP_039033883
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All DBs
Position
Unknown
AA seq
362 aa
AA seq
DB search
MASTLKILLFVLLIQSAILTESSRHSKSKKKKIDVHIFNVVDFGATGDGTMMILRALCKH
GMLLANPQLRHQCAKYCNSNNITFQIDGNIVAPSKPSAWQCIPDCDHWISFRKFDGLSIQ
GYGIINGQGSKWWTISCKDENKNCPSRKPTGLVIADSNNVKINGLTFEDSPQVHIALERY
TLVHATKLTITAPKTSPNTDGIHIQHSTNVSIHNSNIQTGDDCISIGNGSKYINITKIEC
GPGHGISIGSLGINGRTDEVEYVHVKNVTFHKTTNGVKIKTWQTSNVEISNVTYKDIHGT
SSRKIAVELSCSESIPCKNIIMKDISLSYKDDNAHTSCLNAHGFKNGSVEPDVPCLQKHD
NL
NT seq
1089 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaactttgaaaatcctcttgtttgttcttttgattcaatctgccatattgact
gaatcttctcgacactccaagtcgaagaagaagaagattgatgtccatatatttaacgtt
gtcgactttggagctaccggagatggaactatgatgattctcagagctttatgcaagcat
gggatgctgcttgcgaatcctcagcttcgtcaccaatgtgccaaatattgcaattccaat
aacattactttccagattgatggcaacatcgtagccccaagcaaaccttctgcatggcaa
tgcataccagattgtgatcattggattagcttcagaaagttcgatggtctctccattcaa
ggatatggtatcatcaatggccagggttctaaatggtggactatttcttgcaaagatgag
aataagaactgccccagccgaaaacccacaggtttggtgattgcagactccaataatgta
aagattaatggattaacctttgaagacagtccacaggtgcacattgcacttgaaaggtat
actttggttcatgctactaagcttactatcacagcccctaagacaagtcccaacaccgat
ggcattcatattcaacattccactaatgtttctattcacaactccaacattcaaactggt
gatgattgtatctcaattggaaatggttctaaatatattaatatcactaaaatcgaatgt
ggtccgggtcatggaattagcattggaagtcttgggattaatggaagaaccgatgaggtt
gaatatgttcatgtaaagaatgttacttttcataaaacaactaatggagtcaaaataaag
acgtggcagacatcgaatgtggagattagcaatgttacgtataaagacatccatgggaca
tcaagtaggaaaatagcagttgaactttcatgcagtgagtccatcccatgcaaaaatata
atcatgaaagacatcagtttgagctataaagacgacaatgcccacacctcatgcctcaat
gctcatggctttaaaaatggaagtgttgaaccagatgtaccatgcttacaaaaacatgat
aatttatag
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