Hibiscus syriacus (Rose-of-Sharon): 120169992
Help
Entry
120169992 CDS
T09559
Name
(RefSeq) SWI/SNF complex component SNF12 homolog
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
120169992
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hsyr03021
]
120169992
03036 Chromosome and associated proteins [BR:
hsyr03036
]
120169992
Transcription machinery [BR:
hsyr03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
120169992
Chromosome and associated proteins [BR:
hsyr03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
120169992
PBAF complex
120169992
GBAF(ncBAF) complex
120169992
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
120169992
NCBI-ProteinID:
XP_039033991
LinkDB
All DBs
Position
Unknown
AA seq
554 aa
AA seq
DB search
MMSMNNNNPSKRLGASSSPFANAGMVAPSMSGNPAFSQAQAQAQAQAQAQAQLSAGFQAQ
FQLSQAQALALAQSKALAHARAQGQSVNAQFQAQLQAQSLALSQAQNAGLGNLGSSSPSM
STPGNASAKRIFQRPPMYPPAVPMTNTMPPLRTMELTQAARRKKQKVPDKQLQERVATIL
PESALYTQLLEFEARVDAAVARKKVDIQEALKSPPSVQKTLRIYVFNTFANQIQTIPKKP
NADPPVWTLKIIGKILEDGIDPDQPGFVHKTNPLYPKFSSFFKRVTISLDQRLYPDNHII
IWEHARSPAPQEGFEVKRKGEKEFTVNIRLEMNYVPEKFKLSSALMEVLGIEVDTRPRIL
AAIWHYVKARKLQNPNDPSCFNCDAQLQKVFGEDRVKFTMVPQKILQHLSPPPPIHLEHK
IKLSGNSPAGNACYDVLVDIPFPIQRELSALLTNGEKTKEIDACDESICATIRKIRDHCR
RRAFFLGFSQSPVEFINALVQSQTRDLKLVTGEPSRSAEKERQSDFFNQQWVEDAVIRYL
NRKPPPGSDAPGST
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atgatgtctatgaacaacaataatccctccaagagacttggggcgtcttcgtcgcctttt
gctaatgcggggatggtagctccatcgatgtctggaaaccctgcattctcgcaggcacag
gcacaggcacaggcacaggcacaggcacaggctcaactaagtgctggttttcaagctcag
tttcagttatcacaagctcaggccctggctctggctcagtcgaaagctctggcccatgct
cgagctcaagggcagtctgttaatgcccaattccaagcacaacttcaagctcaaagtttg
gcccttagccaagctcaaaatgctggccttggtaatttaggttcctcttctccatccatg
tctactcctggcaatgcaagtgcaaagaggatctttcaaaggccccccatgtatcctcct
gctgttcctatgacaaacacgatgccccctttgagaacaatggaacttacacaggccgct
agaagaaagaagcagaaggttcctgacaaacagctacaagaacgagtggctactattctt
cccgaatctgctttgtatacccagcttcttgagtttgaggcacgagttgatgctgcggta
gctcggaaaaaagttgacatccaagaggcactaaaaagcccacctagtgttcagaaaact
cttcgaatatatgttttcaacacatttgccaatcagattcagacaattccaaaaaagcct
aatgcagatcccccggtgtggacccttaagattattgggaagatcttggaagatgggata
gatccagatcagcctgggtttgttcataaaacgaaccccttgtaccctaagttttcatcc
ttcttcaaaagagtgactatctctttggatcagagactatatccggataatcatatcatt
atatgggagcatgctcgatctcctgcaccacaagaaggttttgaggtgaagcgaaaaggg
gaaaaagaattcactgtgaatatacggttagaaatgaattatgttcccgagaagttcaag
ctttcttcagctttaatggaagtccttggtattgaggttgatacacggcctagaatttta
gctgcaatctggcattatgtgaaggctagaaaacttcaaaacccaaacgatccctcttgt
tttaattgtgatgcacagcttcagaaagtttttggggaagacagggtgaaatttaccatg
gttccacagaagatattacagcatttgtctccaccaccacccatacatttggagcataaa
atcaagctttccggtaatagtcctgctggaaatgcatgctatgatgtgttagtcgacata
ccctttcctatacaaagggaattgtctgctctgttgacaaatggagaaaagaccaaagag
attgatgcttgtgatgaatcaatatgtgctaccataaggaaaattcgtgaccactgtaga
aggcgtgcattttttctaggattcagtcaatctccagtagaatttataaatgctttagtt
cagtctcagacccgggatctgaaattggtaaccggagaacctagtcgaagtgctgaaaaa
gagcgccaatcagatttctttaaccaacaatgggtcgaagatgctgttatccgttatctg
aatcgcaagccgcctcccggaagtgatgctccaggaagcacatga
DBGET
integrated database retrieval system
