Hibiscus syriacus (Rose-of-Sharon): 120170015
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Entry
120170015 CDS
T09559
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 23-like isoform X1
KO
K15166
mediator of RNA polymerase II transcription subunit 23
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hsyr03021
]
120170015
Transcription machinery [BR:
hsyr03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Other mediators
120170015
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Med23
Motif
Other DBs
NCBI-GeneID:
120170015
NCBI-ProteinID:
XP_039034015
LinkDB
All DBs
Position
Unknown
AA seq
1605 aa
AA seq
DB search
MEQNQRSVAAAANSRAYQFHPARAAITDLFNLYLGVRSSRQKADDSVQEPPNKTHKRVLA
LNRELPPRNEQFIIDFEQLQTQFGDQDQLQSVTESVLISLVIQCCSHAPRAEFLLFALRS
LCSIGYVNWDTLLPSLLSSVASAEVPVSQGSQGVPSVSSTSLSQSGMMPSTSVIANTSNI
QSSNHGSSLTPVHVIGSPAQSTIEPSSGATLSPVKLSDIACNGQPSTTRIDSSIRDNAIS
NLRQLCCKIILTGLECNLKPVTQAEIFYHMLNWLVNWDQRLQGNEECDGKSWRLDKALIE
WLHSCLDVIWLLVEEDKCSVPFYELLRSGLQFIEKIPDDEALFTLILEIHRRRDMVAMHM
QMLDQHLHCPTFGTHRILPQTIPNISVEGVANLRYSPITYPSMLGEPLHGEDLAASIQRG
SLDWERALRCIRHAIRSTPSPDWWKRVLVVAPFYRGSVPTPGAVFTCDMICEATIDRIVE
LLKLTNSEINCWQEWLVFSDIFFFFMKSGCIDFVDFIDKLGSRLTASDHHVLNTNHVTWL
LAQIIRIEHVMTALNTDSRKVETTRKILSFHREDRSSDPNNPQSILLDFISSCQNLRIWS
LNTSTREYLNNEQLQKGKQIDEWWRQVSKGERMMDYMNMDDKSIGMFWVVSYTMAQPACE
TVMNWLSSGGVTELLPGANVQPNERFMVMREVSPLPISLLSGFSMNLYLKLVFQMEESLF
AGQVVPSIAMVETYTRLLLIAPHSLFRSHFSHLAQRNASLLSKPAVTLLVLEIVNYRLLP
LYRYQGKCKPLMYDVTKIISALKGKRGDHRVFRLAENLCINLILSLRDFFSVKREGKGPT
EFTETLNRITIITLAITIKTRGIADADHLLYLQTMLEQVLATSQHSWSEKTLRYFPSLLR
DILMSRTDERGMAIQAWQQSETTVINQCKQLLSSSADPNYVMTYINHSFLVHRQYLCAGA
WILMQGHPENINSGNLARVLREFSPEDVTSNIYTMVDVLLHHIHVELQHGHSFQDLLLKT
CANLAFFVWTHELIPLDILLLALIDRDDDPHALRIVISLLDRQELQQRVKLYCMNRGPPE
HWLYTGIFKRNDLQKALGNHLSWKERYPTFFDDIVARLLPVIPLIVYRLIENDAIESADR
ILAMYSVFLAYHPLRFTFVRDILAYFYGHLPGKLIVRILNVLDLSKIPFSESFPQHIGSS
NPAICPPLEYFATLLLALVNNVIPPLNSNSRSGSMGDASNNSVRGPHNKSPATPQSGPAN
ASEGQKAFYQIQDPGTYTQLVLETAVIEILSLPISSSQIVSSLVQIVVNIQPTLIQSSNG
LHGASNSGMQVSVLPTSPSGGSTDSAGRSTPSVSGINTSSFVSRSGYTCQQLSCLFIQAC
GLLLAQLPPEFHLQLYMEASRIIKESWWLTDGKRSLSELDSAVSYALLDPTWASQDNTST
AIGNIVALLHSFFSNLPQEWLEGTHVIIQHLRPVTSVAMLRIAFRIMGTLLPRLVNAHNL
FNKILSLLLNTLVDVFGKNIQPSVPVEASEITDLIDYLHHIIHYEGQGGPVQANSKPRSE
VLAICGRAAESLRPDVQHLLSHLKPDINTSIYAATHPKLAQNPST
NT seq
4818 nt
NT seq
+upstream
nt +downstream
nt
atggaacaaaatcagagatcagtggcagcagctgcaaattcccgagcctatcaattccac
cctgcacgagctgccattactgatctctttaatctttacttgggagtaagaagtagccgc
caaaaagctgatgattctgttcaagaaccaccgaacaaaacccataagcgtgtgctcgca
cttaacagggagcttcctccccgaaatgagcagttcatcatagattttgagcaacttcag
actcagtttggtgaccaagatcagctgcagtctgtgacagaatctgttctaatatctttg
gttattcagtgttgtagtcatgcaccacgggctgagtttcttctttttgctttacgtagt
ttgtgcagtataggctacgttaattgggatacccttttgccatcccttctttcttcagtt
gcctctgcagaagtgccagtgagtcaagggagtcagggagtgccttcagtttcatcaaca
agtttatcacagtctggaatgatgccatctactagtgtaattgctaacacttctaatatt
cagtcttcgaatcatggatcttcgttaactccagttcatgttattgggtctccagcacaa
tctacaattgaaccatcttcgggagctactttatctcctgtaaaattatctgatatagcc
tgcaatggtcagccgtctacaactaggatagattcatctataagagataatgctataagc
aatttacgtcagttatgctgcaagatcattttaactgggcttgaatgtaatttgaaacca
gtgactcaagctgaaattttctaccatatgctgaattggctggttaattgggatcaaagg
ctgcaggggaatgaggaatgtgatggaaagtcctggagactggacaaggctctaattgaa
tggctacacagttgtttggatgtaatatggctgttggttgaggaagataaatgcagtgtt
cccttctatgaactacttcgaagtggattgcagtttatagaaaaaattcctgacgacgaa
gccttgtttactcttatcttggaaatacacaggaggagagatatggtggctatgcatatg
caaatgttagaccaacatcttcactgcccaacatttggaactcatcggatattgccacag
acaattcctaacatttctgttgaaggtgtggcgaacttgcggtattcaccaattacatat
ccaagtatgcttggagaaccgcttcatggagaggatcttgcagcttccatacagagaggt
agtttggactgggagagagccttacgttgtataaggcacgcgatacgctctactccttct
cctgattggtggaaacgtgtgcttgttgtggcacctttttatcgaggttcagtgcctact
cctggtgctgtttttacctgcgatatgatttgcgaggcaacaattgatagaattgttgag
cttttgaagttgacaaattcagagataaattgctggcaggagtggcttgtcttctcagat
attttcttctttttcatgaaaagtggatgcatagattttgttgattttattgataagctg
ggctcacgccttacagcaagtgatcaccatgtacttaatacaaatcatgttacctggctt
cttgcacaaatcattcgaattgagcatgtgatgactgctttgaatactgattctagaaag
gtggagacaacaaggaagattctatcatttcacagagaagataggagctctgatcctaat
aatccccaaagcatcctgcttgatttcattagcagttgtcaaaacttacgcatttggtca
ctgaatacatcaactagagaatacttgaacaatgaacagttacagaaagggaagcaaata
gatgagtggtggagacaagtgagcaaaggggaacgcatgatggattatatgaatatggat
gataaatcaattgggatgttttgggttgtctcctacaccatggcacagcctgcttgtgaa
acagtcatgaattggttatcttctggtggagttacagagttgttaccaggagcaaatgtg
cagcccaatgagagattcatggtgatgcgggaagttagtccgttgccgatatcactgtta
tctggcttttcaatgaatctttatttgaagttggtctttcaaatggaagaatctttattt
gctgggcaggttgttcctagtatagctatggttgaaacatacaccagattgttgctcatt
gcacctcattcattattccgttcacacttcagtcatttggcacagaggaatgcttcttta
ttgagcaagcctgcggtgacacttttggttcttgaaattgtgaactatcgcctgcttcca
ctctacaggtaccaaggaaaatgcaagcctctgatgtatgatgttacaaaaataatttct
gcattaaaaggaaaacggggagatcatcgtgtatttagattagctgagaacttgtgcata
aatctgattttgtcattgagagactttttctcagtgaaaagggaagggaaggggcccact
gaattcacagaaactttaaatcggataaccattatcactcttgctatcaccattaagacc
cgtggaattgcagatgctgatcacctactttaccttcaaacaatgttggaacaagtattg
gcaactagccagcattcgtggtcagagaaaacactacgatattttccctctcttcttcgt
gatattttaatgtcacggacagacgaaagaggaatggcaattcaagcatggcaacagtca
gaaacaacggtgattaaccaatgcaaacaacttctttcatcatctgctgatccaaattat
gttatgacttatatcaatcacagtttccttgtacaccgtcaatacctatgtgccggtgca
tggatactgatgcaagggcaccctgaaaacattaacagtgggaacttggcacgggtcttg
agagaattttcacctgaagatgtgacatccaatatttatacgatggtggatgtattactt
catcatattcatgtggagcttcagcacgggcattcctttcaggaccttttattgaaaact
tgtgcaaacctggccttttttgtttggacccatgagcttattcctttggatatattactt
ctggcactcattgaccgtgatgatgatcctcatgctctgcgtatcgtgataagcttactt
gacaggcaagagcttcaacaaagggtgaaattgtactgtatgaatcgtggcccacctgag
cattggctttacactggaatatttaagcggaatgacttgcaaaaagcccttggcaatcat
ctctcatggaaggagaggtatcctacattctttgatgatattgtggcacgtttgcttcca
gtcatccccttaattgtttacagacttattgagaatgatgctatagaatcagctgacagg
attttggctatgtactctgtatttttagcttaccaccctttgagatttacatttgttcgt
gatattcttgcatatttctatggtcatctacctggaaagttaattgttcgaattctgaat
gtactagatctcagcaagattcctttttctgagtcattccctcagcacataggttcatca
aatcctgcgatatgcccccctctagaatattttgcaactcttttattggctcttgtgaat
aatgtgatacccccattaaacagtaactcaagaagtgggtcaatgggagatgcttctaat
aactcagtgcgtggtcctcataacaaatctcctgcaacacctcaatctgggccagcaaat
gcttctgagggtcaaaaggcattctatcaaattcaggatccaggaacatatactcagctg
gttctggaaacagctgttatagagatcctctcgcttcccatttcttcttctcagattgtg
tcatctctagttcaaattgttgttaacatacaaccaacactgattcaatccagtaatgga
ctgcatggagcttctaatagtggcatgcaagtttcagttttaccaacatccccctcagga
ggcagtacagatagtgcaggcagatcaactccttctgtgtcggggatcaacacctctagt
tttgtttcccgaagtggttatacttgccaacagctttcatgcttatttatccaagcttgt
ggtctgttgttggcccaactccctcctgagtttcacttacaactttacatggaggcatca
cgaataattaaagaaagttggtggctaactgatgggaagagatcactgagcgaactagac
tctgctgttagctatgctttgctggatccaacttgggcttcccaagataatacctctact
gccataggtaatatagttgcattgcttcattctttcttcagtaacctcccccaagaatgg
ctagagggaacacatgtcattattcaacatctccggccggtaacatcagttgccatgttg
agaatagcattccggataatgggcactttgctaccacgacttgtcaatgctcacaatctt
ttcaacaagattctgtcattactattgaatacactggtggatgtatttgggaaaaacatt
caaccatcggtccccgtggaagcatcagaaataacggacctcatcgactaccttcaccat
atcatccactatgaaggacaaggagggccagtgcaagcaaacagcaagccaaggtcagag
gtgttggctatttgtgggagagctgctgaaagtctacgccccgacgtacagcatcttcta
tcccacctgaaacctgacattaacacttcgatatatgctgctacgcatcccaagttagct
cagaatccctccacctga
DBGET
integrated database retrieval system
