Hibiscus syriacus (Rose-of-Sharon): 120170147
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Entry
120170147 CDS
T09559
Name
(RefSeq) septin and tuftelin-interacting protein 1 homolog 1-like
KO
K13103
tuftelin-interacting protein 11
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hsyr03041
]
120170147
Spliceosome [BR:
hsyr03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
120170147
Other components
Complex C specific factors
120170147
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
Motif
Other DBs
NCBI-GeneID:
120170147
NCBI-ProteinID:
XP_039034084
LinkDB
All DBs
Position
Unknown
AA seq
860 aa
AA seq
DB search
MDEYQEMERFGMDNDFEDGRWIDGEFYYKKRKEKRTQTKDDVLYGVFASDSDSEDGGYSS
SRKRRRREFGKKTDLTKPVNFVSTGTVMPTQEIDKNSKVVNDNIVHDDNENDSRPGLGSG
VGLGFSGNDTSQKSDVNIGSDEDDVSSFLPSSFGRKIKEGAQRREKERERLKMEKKSLGG
RREVGGGSGDVGSFEKHTKGIGLKLLEKMGYKGGGLGKNEQGIVAPIEAKMRPKNMGMGF
NDFKEAKLPELQQLEEKKSASQQPVGKPKERLWSKNSKGRKKEVYITVEELLAKKQEETV
EIVQKVIDMRGPQVRVLTNLENLDAEEKARENDVPMPELQHNLKLIVDLAELDIQKIDRD
LRNEKEIALSLQKEKEKLEIEFSRQKQHLANMERITGVLDQIEEENSSGKLTLESLASCF
RDLQRNYADDYKLCNLSCIACSLALPLFIRMFQGWDPLSNPSYRMEMISAWKDLLQIEGG
YDIWEDVATPYSQLISEVVLPALRISGINTWEPRNPEPMLRFLESWEKLLPSSILQTILD
TVVMPKLSGAVDSWNPRKETVPIHVWVHPWLPMLGTKLEGLYQTIRMKLSNVLDAWHPSD
PSAYAILSPWKTVFDSVSWEQLMRQYIVPKLQIALQEFQINPADQKLDQFHWVMSWASAI
PIHLMVDLMEKFFFVKWLQVLYHWLCSKPDFDEIKNWYMGWKALLPQELLANESIRNQLN
YGLEMMIQAADNVPVEQPGLRENVTYLKVREQRQFEAQQRAAAHAQPQAAAGLGTANQMD
GVPEMSLKEVVEAYAQQHELLFKPKPGRMHNGQQIYGFGNISVVIDSLNQKVYAQKDNGW
SLVLLDDLLKMHYNSLARRR
NT seq
2583 nt
NT seq
+upstream
nt +downstream
nt
atggatgaatatcaagagatggaaaggtttgggatggataacgattttgaagacgggcga
tggatcgacggcgaattctactataaaaagcgcaaggaaaagcggactcagactaaagat
gatgtcctttacggtgtttttgcatctgattccgactctgaagacggtggttattcttca
tcaaggaagagacgaaggagggaatttgggaaaaaaaccgacttgacgaagcctgtcaac
tttgtttctacaggtaccgtaatgcctacccaagaaatcgataagaattctaaggttgtg
aatgataatattgtccatgatgataacgagaatgatagcaggcctggattggggtctggc
gtaggtttaggatttagtggtaatgatacttcgcaaaaaagtgatgttaatattggtagt
gatgaggatgatgtttctagttttttgcctagctcatttgggaggaagataaaggaaggg
gcacaaaggagagagaaagaaagggagaggttgaaaatggagaagaaaagcttaggaggg
agaagggaggttggaggtggtagtggggatgttgggtcatttgagaagcatacaaagggt
attgggttgaagttgcttgagaaaatggggtataaaggaggtggtcttgggaagaatgaa
caagggattgttgctcctattgaagcaaagatgaggccaaagaatatgggaatggggttt
aatgattttaaggaggctaagttgccagagttgcagcagttggaagagaagaagagtgca
agtcagcagcctgttgggaaaccaaaggagaggctttggtcgaagaattctaagggaagg
aagaaggaggtgtatattacagtggaggagttgttagcgaagaagcaagaagaaactgtt
gaaattgttcaaaaggtgatagatatgagggggccacaggttagagttttgaccaacttg
gagaatctagatgccgaagagaaggcaagagagaatgatgttccaatgcccgagttgcag
cataacttgaagttaattgttgacttggcagagcttgatattcaaaagatcgatagggat
ttaaggaatgaaaaagagatagcattgagcttgcagaaggaaaaggaaaagttggagatt
gagttttcacgtcagaagcaacatttggctaatatggaacgaattactggtgttctggac
caaattgaggaagagaactcatctggaaaattaaccttggagtcccttgcaagttgtttt
agggatttgcagaggaactatgctgatgattacaaactgtgtaacttgtcctgcattgca
tgttcactagccttgcccctgtttataagaatgtttcagggttgggatcctctatcaaat
ccatcttacagaatggagatgatatcagcatggaaggacttattgcaaatagagggcggt
tatgacatttgggaggatgtagcaacaccttattctcagttgatctctgaagttgtttta
ccagccttgagaatatctggcatcaacacatgggagcctaggaaccctgaaccaatgctc
agatttttggaatcatgggaaaagttgttgccgtcatccattcttcaaaccatattggat
actgtggtaatgcctaaattgtcaggagcagttgactcgtggaacccacgtaaggaaact
gttccaatccacgtttgggttcatccttggctgccaatgttggggacaaagttggaaggt
ctgtatcaaaccatacgaatgaagttgagtaatgttcttgatgcttggcacccaagtgat
ccttctgcttatgctatattatcgccttggaagactgtatttgattcagtgagttgggaa
caacttatgcgccaatatatagtcccaaagttgcagattgccctgcaggagttccaaata
aaccctgcagatcagaagcttgatcagtttcattgggttatgtcgtgggcctctgcaatt
cctattcacctcatggttgatttgatggagaagtttttctttgtaaagtggctgcaggtt
ttgtatcactggttgtgttcaaaacccgactttgacgagataaaaaattggtacatgggt
tggaaggcacttctgccacaggagcttttggctaatgagagtatccgtaatcaacttaat
tatggtcttgagatgatgattcaggctgctgacaatgtaccagtagagcagcctggtttg
agggagaatgttacatatcttaaggtgcgtgaacagaggcaatttgaggctcagcagaga
gcagccgctcatgcacaaccgcaagctgcagccggcctgggcactgcaaaccagatggat
ggtgttcctgagatgagtttgaaggaagtagttgaggcctatgcacaacaacacgagttg
ctattcaagcccaagcctggcaggatgcataatggtcaacagatatatggcttcggtaac
ataagcgtagtaattgattcacttaaccagaaggtttatgcccagaaggataatggctgg
tccttggtcttacttgatgatttgttgaaaatgcactataattctcttgcaaggagacgt
tga
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