Hibiscus syriacus (Rose-of-Sharon): 120170282
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Entry
120170282 CDS
T09559
Name
(RefSeq) cyclic nucleotide-gated ion channel 2-like
KO
K05391
cyclic nucleotide gated channel, plant
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
120170282
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
hsyr04040
]
120170282
Ion channels [BR:
hsyr04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
120170282
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Ortholog
Paralog
GFIT
Motif
Pfam:
cNMP_binding
Ion_trans
TMEMspv1-c74-12
DUF3382
PspB
DUF308
Ion_trans_2
Motif
Other DBs
NCBI-GeneID:
120170282
NCBI-ProteinID:
XP_039034210
LinkDB
All DBs
Position
Unknown
AA seq
712 aa
AA seq
DB search
MPSLSNFSLSRWFGLCQQRNTIPENSNGGGGDINEENPISYTTGCYACTQVGVPVFHSTS
CDQAHPPEWEASAGTSLVPIQARTRPGQKKAQQAATSTRRRYGPFGRVLDPRMKRVQNWN
RFFLLARGMALAVDPLFFYALSIGRGGSPCLYMDGGLAAIVTVLRTCVDAVHLVHLWLQF
RLAYVSRESLVVGCGKLVWDARAIASHYLRSLKGFWFDAFVILPVPQAVFWLVVPKLIRE
EKIKLIMTIMLLIFLFQFLPKVYHSICLMRRMQKVTGYIFGTIWWGFGLNLIAYFIASHV
AGGCWYVLAIQRVASCLRQQCARNAQCNLSLSCSKEVCYQFLFLAETVGNFCGGNSTKVV
GKPLCLEVHGPFDYGIYQLALPVVSSNSFSVKILYPIFWGLMTLSTFGNDLEPTSHWLEV
VFSIFIVLAGLMLFTLLIGNIQVFLHAVMAKKRKMQLRCRDMEWWMKRRQLQSRLRQRVR
HFERQKWTISGGEDEMELIKDLPEGLRRDIKRYLCLDLIKKVPLFQNLDDLILDNICDRV
KPLVFSKDEKLIREGDPVQRMVFIVQGRIRRNQSLSKGIVATSFIEPGGFLGDELLSWCL
RRPFMDRLPASSATFVCIESIEAFGLEANNLKYITDHFRYKFANERLKRTARYYSSNWRT
WAAVNIQLGWWRYRRRTGGPMVSVAENGNSSDRRLLQYAAIFMSIRPHDHLE
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgccttctctgtccaacttctccctctcaaggtggtttggactttgtcagcaacggaac
acaatcccagaaaattctaacggcggcggcggtgacatcaacgaagaaaacccaatttcc
tacactacaggatgctacgcttgcactcaagtcggtgttccagttttccactccaccagc
tgcgaccaagctcacccgcccgaatgggaagcctccgccggcacctccctcgttcccatt
caggctcgtacgaggccgggtcagaagaaggctcaacaagccgccaccagtacccgaaga
cgttacggcccgtttggacgggttcttgatccgagaatgaagcgggtgcaaaactggaac
cggtttttcctattggcacgtggaatggctttagccgttgatcctttgttcttttatgct
ttgtcgataggcagaggcggctcgccgtgtctgtatatggatggcgggttggccgccatt
gtaaccgtgcttcgcacgtgtgtggacgcggtgcatttggtccatctatggcttcagttc
aggctggcgtacgtgtcgagggagtcgctcgtcgtgggttgcggtaaactcgtgtgggat
gcacgtgccatcgcctctcattatcttcgttccctcaaaggtttctggtttgatgccttc
gtcattctgccagttcctcaggccgtattttggttagttgtaccaaaattaataagggaa
gagaaaatcaagcttataatgaccataatgttgttaatcttcttgttccaattcctccca
aaggtttaccacagcatttgcttaatgagaaggatgcaaaaggtcactggttacatcttt
ggcaccatttggtggggctttggccttaacctcattgcctacttcattgcttctcatgtt
gctggagggtgctggtatgtccttgcgatacagcgggttgcctcgtgtctcaggcaacaa
tgcgcgagaaacgctcagtgcaacctttcattgtcgtgctcgaaggaggtgtgctaccag
tttttatttctggctgaaacggtcggaaatttttgcggtggtaactcgaccaaagttgtg
gggaaacctttatgtttagaggttcatggaccattcgattatgggatttatcagttggct
ctccctgttgtttctagcaactctttctctgttaagatcctttatccaatattttgggga
ttaatgactctcagcacctttggaaatgatcttgaaccaacaagtcactggttagaagtg
gtgttcagtatcttcattgtgcttgctggactgatgctcttcactttactgattggaaac
atccaggttttcttgcatgctgtaatggccaaaaagagaaaaatgcagctaagatgtcga
gacatggaatggtggatgaaacgcaggcagttacagtcgcgtttgagacagcgagtccgc
cactttgaacgtcaaaaatggacaatatcgggtggagaagacgaaatggaactgatcaaa
gacttacccgaaggtctccggagagacattaagcgctacctttgccttgaccttatcaag
aaggttcctttgttccaaaacttggatgatcttattctcgataacatctgtgatcgagtt
aagccactcgtattctctaaagatgaaaagttaatcagagaaggagatccagtgcagaga
atggtgtttattgttcaaggacgaataagacgtaaccaaagcctcagcaaaggcattgtc
gccaccagttttatcgagccgggaggattcctgggtgatgagttgttgtcatggtgtctt
cgcagaccatttatggatcgtcttcctgcctcgtccgcaacattcgtatgcatagagtcg
attgaagcgttcggtctcgaggcaaacaatctcaaatacatcacggatcacttcaggtac
aagtttgccaacgagaggcttaagagaacagccagatactactcatccaactggcgaacg
tgggcagccgtgaatatacaactcggttggtggcgttacaggaggaggactggaggtccg
atggtttctgtcgccgaaaacggaaacagcagtgaccgacgattgctacaatatgctgcc
atatttatgtcaataaggccacatgatcatctagaataa
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