Hibiscus syriacus (Rose-of-Sharon): 120170355
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Entry
120170355 CDS
T09559
Name
(RefSeq) ERAD-associated E3 ubiquitin-protein ligase HRD1B-like
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr04120
Ubiquitin mediated proteolysis
hsyr04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
120170355
04120 Ubiquitin mediated proteolysis
120170355
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hsyr04121
]
120170355
Enzymes [BR:
hsyr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120170355
Ubiquitin system [BR:
hsyr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
120170355
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4_3
zf-ANAPC11
FlxA
zf-RING_16
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
120170355
NCBI-ProteinID:
XP_039034244
LinkDB
All DBs
Position
Unknown
AA seq
532 aa
AA seq
DB search
MMRLQTYAGVSIVAMLAVIYHAFNSRGQFYPAMVYLSTSKISLVLLLNMGLVFMCTLWQI
TKWIFLGSLREAEVERLNEQSWREVMEILFAITIFRQDFSVPFLTMVTALLLIKALHWLA
QKRVEYIETTPSVPMLSHVRIVSFLGFLLVLDCLFLSSSIKFLIETRQASVSLFFAFEYM
ILATTIVSTFIKYCFYVSDMLMEGQWEKKPVYTFYLELIRDLLHLSMYLCFFLVIFMNYG
VPLHLIRELYETFRNFKIRVADFMRYRKIALNMNDRFPDATPEELTANDATCIICREEMT
TAKKLICGHLFHVHCLRSWLERQHTCPTCRALVVPPENGTSSSNAQGQGSGTSSARQGSD
GDMAAENLTQNQARLQAAASAASIYERSYVYPSSNTLVWSPGYAVLPKALGSLADSMKVE
ANGASTSTGEQVAIPGGQASMPFPQFPHYACVPFQLPFANGNSGEASSGNSNVADSHLEA
QKKIIQQQIEVLQHQLKLLQMQKPKIEGSTDTGLAASSDRKGKSISSSSPED
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atgatgaggctgcaaacatatgccggcgtcagcatagtcgctatgctagctgttatttat
catgcatttaacagtagaggccagttttatcctgctatggtgtatttatcaacctcgaag
atcagcttggtgctgcttctcaacatggggctcgtctttatgtgcaccttatggcaaata
accaagtggatattccttggttcccttcgtgaagccgaggtcgagcgattaaatgagcag
tcgtggagagaggtcatggagatcctctttgcgatcactatattccggcaggacttctcc
gttccattcctcacgatggttactgctctgttgttaatcaaggctttgcattggttggca
cagaaaagggttgagtacattgaaacaaccccttctgtccctatgttgtctcatgttcgg
attgtttcttttctgggtttccttcttgttctagattgtctgtttttgtccagctcaatc
aagtttctgatcgaaacacggcaagcgtcagtttccctattttttgcatttgagtacatg
atattggcaacgactatagtgtcaacttttataaaatattgtttctatgtaagtgacatg
cttatggaaggacaatgggaaaaaaagcctgtatataccttctacttggagctcatccgg
gacttgcttcacttgtctatgtatttatgcttctttcttgtgattttcatgaactatggc
gtacctcttcacttgatacgggagctatatgaaacctttaggaatttcaaaattcgtgtt
gctgacttcatgcgttataggaaaatcgctttgaatatgaatgatagattccctgatgca
acccctgaggagctcactgcaaacgatgcaacttgtattatatgccgtgaagagatgacc
acagcaaagaagttaatctgtggacatctttttcatgtgcactgtcttcgatcatggctg
gaaagacagcatacctgccctacatgtagagctctggttgtaccacctgaaaacggaaca
agttcatccaatgctcaagggcaagggtccggcacaagttcagctagacaaggttctgac
ggtgacatggccgctgagaatttgacccagaatcaggccaggcttcaggctgctgcctct
gcagcatcaatatacgagagatcttacgtctatccttcttcaaacactctagtttggtct
cctggatatgctgtacttcccaaggctctcgggtcattggccgattccatgaaagttgaa
gctaacggcgcaagcacatccaccggagaacaagttgccattcccggtggacaagctagc
atgccatttccacaattcccgcattatgcttgtgttcctttccaattaccttttgctaat
ggtaactcgggagaggcatcaagcggtaactcgaacgttgcagattctcacttggaagct
cagaaaaagataattcagcaacaaatcgaggtgctgcaacaccagctcaaactcctacag
atgcagaagccgaaaatcgaaggaagcacggacactggtctcgctgcctcctcggataga
aaaggaaaatccatatcttcgtcttctccggaagactga
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