Hibiscus syriacus (Rose-of-Sharon): 120170363
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Entry
120170363 CDS
T09559
Name
(RefSeq) polygalacturonase QRT2-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr00040
Pentose and glucuronate interconversions
hsyr01100
Metabolic pathways
Module
hsyr_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
120170363
Enzymes [BR:
hsyr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
120170363
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
120170363
NCBI-ProteinID:
XP_039034251
LinkDB
All DBs
Position
Unknown
AA seq
579 aa
AA seq
DB search
MALVVGQDMATESFARTFVDIDLDDINEGSMPLNFDTQHIDEERTNVSLSGTSKRKRKEN
VEDDHIQFVGEKLGEIAKVLKKFTEDRTPYLYKEVIPMEKERFGDEFLCEIFDFLTKNEL
EAKRIKADGKYLKPHAEGTSCGEDSFQFDFHRGSVYGRLMTTTYRRPYFGVLNERNKLIL
MSGSLSEYEYGDGSQLRLDDAPAPVGPTVVDVDDFGAKADGSDDSKAFKEAWEIACKSYQ
GAIMLVPKNKIYHLKPVDFSGPCNSPLIFKIFGTIKATVHHSDYTSRRWLYFDNVQNLRV
EGGGIINGNGRTWWLNSCKINTALPCSEAPTAVTFSQCSNLKLARLRIENSQQMHLSFSK
CINVKVFNLFVIAPGNSPNTDGIHVTETHNIHIKNCVIRTGDDCISIVSGSQNVRATGIT
CGPGHGISIGSLGAGNSSGYVSNVIVNRATLSRTTNGVRIKTWQGGSGYAKNIKFQNIMM
HNVSNPIIIDQYYCDHHQSPCPKQVSAVQVSNVVYKNIRGTSASNVALKFNCSQTHPCQE
IYLQNVAIKSSQEDKEEHIAEASCSNIRLSYRGDVSPPC
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atggctcttgttgtcggtcaagatatggcaacagagagttttgctagaacttttgtcgat
atagacttggatgatattaatgaaggatcaatgccattaaatttcgacactcaacatatc
gatgaggaaagaacaaacgtatctttatctggtacatcaaaacgtaaaaggaaagaaaac
gtcgaggatgatcatattcaatttgtaggtgagaaacttggtgagattgctaaagtactc
aaaaaatttactgaggataggacaccatatctttacaaagaagttataccaatggagaaa
gaaagatttggtgacgaatttctttgtgagatctttgattttctaaccaagaatgagctt
gaggccaaaagaatcaaggcagatggaaagtatctaaagcctcacgcagagggcacaagt
tgcggggaggactcatttcagtttgattttcaccggggaagtgtttatggccgtctaatg
acgacgacctatcgtcgtccttattttggggtcttgaacgaaaggaacaaacttatcctg
atgtcgggaagtctgtccgagtacgagtatggtgacggaagtcagttgagactcgatgat
gcgcctgcgccggtcggtccgactgttgtcgatgtggatgatttcggagctaaagctgat
ggaagtgatgattctaaggcgtttaaggaagcttgggaaattgcttgtaagtcgtatcaa
ggagctattatgttggtccctaagaacaagatttatcatcttaagccagttgatttctct
ggaccgtgcaattctcctcttatattcaagatcttcgggacaattaaagccactgtccat
cactcggattacacaagccgacgatggctttactttgataatgttcagaatttaagggta
gaaggtggaggcatcatcaatggcaatggcagaacatggtggctaaattcctgtaaaatt
aacaccgccctcccttgcagtgaagcaccaactgcagtaacctttagccaatgcagcaat
ctgaaattggcacggctgcggattgaaaattctcaacaaatgcatctttcatttagcaaa
tgtatcaatgtaaaagtcttcaaccttttcgtgatcgctcctggaaacagccccaacact
gatggaatccatgtgactgaaacccacaacatacacattaagaactgtgtcatcagaact
ggtgatgattgtatatccatagtgagcggctcgcaaaatgttcgagccacaggcataact
tgtggaccaggacatggaatcagcattgggagcttaggagctggaaattcttcgggttat
gtgtctaatgtaatagtgaatagagcaacactttcgagaaccaccaatggagttagaata
aagacttggcagggaggatccgggtatgccaaaaacataaaattccagaatataatgatg
cacaatgtgagcaatcctataattatagatcaatactactgtgatcatcatcaatcgcca
tgccccaaacaggtgtcagcagtgcaagtgagtaatgttgtttataaaaacatcagagga
acaagtgcctccaatgtggccttgaaattcaattgcagccagacgcatccttgtcaagag
atttacttgcaaaatgtagctataaaatcatcacaagaagataaagaagaacatattgca
gaagcatcatgctctaatattagattgtcttaccgaggggatgtctctccaccttgctga
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