Hibiscus syriacus (Rose-of-Sharon): 120170869
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Entry
120170869 CDS
T09559
Name
(RefSeq) cullin-4-like
KO
K10609
cullin 4
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr03420
Nucleotide excision repair
hsyr04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
120170869
09124 Replication and repair
03420 Nucleotide excision repair
120170869
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hsyr04121
]
120170869
03400 DNA repair and recombination proteins [BR:
hsyr03400
]
120170869
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hsyr04147
]
120170869
Ubiquitin system [BR:
hsyr04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Cullin
120170869
DNA repair and recombination proteins [BR:
hsyr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
120170869
TCR (transcription coupled repair) factors
Cul4-CSA complex
120170869
Exosome [BR:
hsyr04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
120170869
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
Motif
Other DBs
NCBI-GeneID:
120170869
NCBI-ProteinID:
XP_039034647
LinkDB
All DBs
Position
Unknown
AA seq
814 aa
AA seq
DB search
MSLPPTKRSLSSNTAASSSSSHSQPPMKKAKSQAVACSLDPNKNGLHNHHNNQGDNDVVF
DPSSIALDYDSKSDDARAPAAANLSRKKATPPQPAKKLVIKLVKAKPTLPTNFEEETWAK
LKSAINAIFLKQPDPCDLEKLYQAVNDLCLHKMGGSLYQRIEKECEEHISAALRSLVGQS
PDLVVFLSLVEKCWQDLCNQMLMIRGIALYLDRTYVKQNPNVRSLWDMGLQLFRKHLSLA
PEVEHKTVTGLLRMIESERLGEAVDRTLLNHLLKMFTALGIYSESFEKPFLECTSEFYAA
EGMKYMQQSDVPDYLKHVEMRLHEENERCLLYLDAITRKPLIATAERQLLERHIPSILDK
GFKILMDGHRIEDLQRMYSLFSRVNALESLRQALSSYIRRTGQAIVMDEEKDKDMVSSLL
EFKALLDSVLEESFSKNEAFCNTIKDSFEHLINLRQNRPAELIAKFLDEKLRAGNKGTSE
EELEGTLDKVLVLFRFIQGKDVFEAFYKKDLAKRLLLGKSASIDAEKSMISKLKTECGSQ
FTNKLEGMFKDIELSKEINESFKQSSQARKQLPSGIEMSVHVLTTGYWPTYPPMVVRLPH
ELNVYQDIFKEFYLSKYSGRRLMWQNSLGHCVLKADFPKGKKELAVSLFQTVVLMLFNDA
EKLSFQDIKDSTGIEDKELRRTLQSLACGKVRVLQKLPKGRDVEDDDSFIFNEVFTAPLY
RIKVNAIQMRETVEENTSTTERVFQDRQYQVDAAIVRIMKTRKVLSHTLLITELFQQLKF
PIKPADLKKRIESLIDREYLERDKNNPQIYNYLA
NT seq
2445 nt
NT seq
+upstream
nt +downstream
nt
atgtctctgcccccaaccaaacgctctctcagctccaacaccgccgcttcctcctcctct
tctcactctcagccgccaatgaagaaagccaagtcccaagccgtggcttgctctctcgac
ccgaataagaatggccttcacaaccaccacaacaaccaaggcgacaacgacgtcgttttc
gacccttcgtctattgccctcgactatgattccaagtccgacgatgcccgtgcacccgcc
gccgctaatttgtctcgcaaaaaggctaccccacctcaacccgccaaaaagctcgtcatc
aaactcgttaaagcaaaaccgacattgcctacaaattttgaggaggaaacatgggcaaag
ctgaagtcagctattaatgctatatttctgaagcaaccagatccttgtgacttggagaag
ctttaccaggctgtcaatgatctttgcctgcacaagatgggaggaagtctgtatcaacga
attgaaaaagaatgtgaagaacatatatctgcggcattaagatctttggttgggcaaagc
cctgacctggtggttttcttatcgcttgttgagaaatgttggcaagatctttgtaatcaa
atgttgatgattcgtggtatagccttgtacctggacaggacatatgttaaacaaaaccca
aatgtacgttctttgtgggacatgggcctgcaactcttccgtaaacatctttctctggct
ccggaagttgagcacaaaactgtcaccggtcttttacgaatgattgagagtgagaggtta
ggtgaagcagttgacaggacactacttaaccatcttttgaagatgtttactgctttgggc
atttactcggaaagttttgagaagccattcctggagtgcacttccgagttttatgcagct
gaaggaatgaaatacatgcagcaatcggatgttccagattacttgaagcatgtagagatg
aggttacatgaagaaaatgaaagatgtttactctacctggatgctattacaagaaagcca
cttatagcaacagcagaaaggcagctccttgaacgtcatataccttccattcttgataag
ggatttaagattctgatggatggacatcgtatagaggaccttcagaggatgtactcactg
ttttcaagggtcaatgctcttgaatcactcaggcaggccctaagctcatatattcggaga
actgggcaagccattgtcatggatgaagagaaagacaaggacatggtgtcttctttgtta
gaattcaaggccttacttgactctgtattggaagaaagcttttccaagaatgaggcattt
tgtaacactattaaggattcatttgagcatctaattaaccttcgtcagaatcgacctgct
gagctaattgcaaagtttctcgatgaaaagcttcgtgctggtaataagggtacttctgaa
gaggaattagagggtacactggataaagttttggttttattcaggttcatccagggaaag
gacgtctttgaagcattctataagaaggatcttgctaaaagattgctattaggaaagagt
gcttctattgatgcagagaaatccatgatttctaagctgaagacagagtgtggcagccag
tttacaaacaaacttgaaggaatgttcaaggatattgaactatcaaaggagataaatgaa
tcattcaagcaatcatcccaagccaggaaacaacttccatcgggaattgagatgagtgta
catgtcttaacaactgggtactggccaacgtatccacctatggttgttaggcttcctcat
gagttgaatgtctatcaggacatctttaaagagttctatttgagtaagtacagtgggagg
cgtctaatgtggcaaaattcattgggtcattgtgtgttaaaagcagattttcccaaaggc
aaaaaggagctggcagtttccttatttcagactgtagttctgatgttgttcaacgatgcc
gaaaagcttagctttcaagacattaaggattccactggcattgaggataaggagttgagg
aggaccttgcagtcccttgcatgtgggaaagtaagagtcctgcaaaagttgcctaaaggg
agggatgtcgaagatgatgattctttcattttcaatgaagtatttactgctcctctatat
cgtataaaggtaaatgcaatccagatgagagagacagtggaggagaatacaagcaccact
gagagagtatttcaagaccgtcagtatcaggttgatgctgctattgtccggataatgaag
acaaggaaagtgctgagtcacactcttttgataaccgaactcttccaacagcttaagttt
cccattaaaccagctgatttgaagaaaagaatcgagtctctcattgacagggagtacctg
gagcgcgacaagaacaacccacaaatatacaattacttggcatga
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