Hibiscus syriacus (Rose-of-Sharon): 120171081
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Entry
120171081 CDS
T09559
Name
(RefSeq) sister chromatid cohesion 1 protein 4-like
KO
K06670
cohesin complex subunit SCC1
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hsyr03036
]
120171081
Chromosome and associated proteins [BR:
hsyr03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
120171081
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rad21_Rec8_N
Rad21_Rec8
CNDH2_N
Motif
Other DBs
NCBI-GeneID:
120171081
NCBI-ProteinID:
XP_039034813
LinkDB
All DBs
Position
Unknown
AA seq
1181 aa
AA seq
DB search
MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGDSVDSILFPDVPIALRLSSHLL
LGVVRIYSRKVNYLFDDCSEALLKIKQAFRSTAVDLPPEESTAPYHSITLPETFDLDDFE
LPDNEIFQGNYVDHHISSREQITLQDTMGDMVYSTSQFGLDERFGDGDTSQIGLLDEELV
LDQVVLPGSVEVSEYDQGSDVPQKQDPSDLEAVPMDCSGDQVEGLAANSGFVDNDEDVGT
PGLEEVPSLSGVHKALADHVESENHNLTENWYVENASNKSKFLHGDNGPVDQSLHNAINC
DAIVHVPLENGCHISDMEKEQTKQQGNSVHDALSVECTSVVGTIRGSDGLDKVEDMDNGA
MHSMDRTDGECAESPNCSNVTFDLEDHSRRTCSSSIYVRASDGCLENGQASLKSEIGNCA
QTTDNLEEPCSAAKAIASDPSCPLESPSRPTVVDGEAQACQERNDSENLKNPIVDKDLSS
LHVLGSDSLAAAEQNLVDLSGREEEVRAPGASIEVQVEACQTQMSEPALCDDQLENSNNC
AKYDLPAPEKLLSAPEGPLNKPSDLLGNSTPDKEVLAENDEIDAGTKLISGKKRSLTEST
LTIESINSVESFGRPGSRRTADSVPDDDDLLSSILVGRSSVFKMKPTPRLEVASMKRARS
APRSRVTKRKVLMDDTMVLHGDTIRQQLVNTEDIRRIRKKAPCTRPEISLIQRKFLEDEI
FSEPIFTGISGDLASLHSESYDLSSIRISEGEENHASSEVAKNPECSVKPNIAEGGTEGS
SVLVILGNDKQARSSGTLNAQQDSYAVDDVPQLLQHEPFGGITKMEIDRVNIEVANAANH
SVLTELRVSSLTDLVTGDAGNIIAGEVTNTMDGSILNNVTCLLPDQKMGTQPGEDASESD
MRNDKVSHPTEVLEHDVEGIFATETGSKATDELLLEESTTNTSVEVSMTDYPSPVGNGTD
FRATIETGESVNVAQNAYETGRGKAGVADEIQVEDAVLYHDDKGTICKDSKECKLDSTYS
EKVHTALKNTSLLDGETPIFQEVDAVNEEMISLADNRAEREDVAVVNDTEFLNVDDNELG
DDDEDDMPCGDEGRLLENSGWSSRTRAVAKYLQKLFEDEAVNGQKVVSMDGLLGRKTRKE
ASRMFFETLVLKTRDYIHVEQVKPFDNICIKPRAKLMKSSF
NT seq
3546 nt
NT seq
+upstream
nt +downstream
nt
atgttttattcacagtttatattggcgaagaaaggccccttggggacaatatggatagca
gcacacctggagaggaagctgcgaaagaatcaggtggctgataccgatattggtgactct
gttgactctattctgtttcctgatgtaccaattgcactgcgattgtccagtcatcttcta
cttggagtagtgaggatatattctcgaaaggtgaattacctttttgatgattgcagcgaa
gccttgcttaagataaagcaggcatttcgctccactgcagttgacttaccaccggaagaa
tcgactgcgccctaccattcaatcactttgcccgagacttttgatcttgacgactttgag
ctgcccgacaatgagatttttcagggtaactacgttgaccatcacattagctcaagagag
cagattacacttcaagataccatgggtgacatggtttactctacatcacaatttggattg
gatgagcggtttggtgatggtgacacttctcagattggtcttcttgatgaggagctcgtc
ctagatcaggttgtgttgccgggatctgtagaagtttcagagtatgatcaagggtcagat
gtaccacaaaaacaagacccaagtgatttagaagctgtgccaatggattgcagtggggat
caggttgaaggtctagctgcaaattctggatttgtggataacgatgaggatgtgggtact
cctggattagaggaagtgccttccttgtctggcgttcacaaggcattggctgatcacgtg
gaatcagaaaatcacaatctaacagaaaattggtatgttgaaaatgcttctaataaatca
aaatttctccatggggataatggtccagtggatcagtctttgcacaatgctataaattgt
gatgctatagttcatgtgcctcttgaaaatggttgccacattagtgacatggagaaagag
caaactaaacaacaaggaaattctgtccatgatgccttgtctgtggagtgcacatctgtt
gttggtactatcagaggatctgatggtttagataaggtggaagatatggataatggtgct
atgcactctatggatagaactgatggggaatgtgcagaatctcctaactgctccaacgtc
acctttgatttggaggaccattctcgaaggacatgttcaagtagcatttatgtgcgtgca
tcagatggttgtttggagaatggtcaagcctcactcaaatctgaaattggcaattgtgct
caaaccactgacaatttagaagagccatgctcagctgccaaagcaatagcttcagatcct
tcctgtccgttggagtcgcccagtagaccaacagttgttgatggtgaagctcaagcttgt
caggaaagaaatgattctgaaaatttaaaaaaccccattgttgacaaagacctctcgtct
cttcatgttcttggaagtgatagtttggctgctgcagagcaaaacttggtcgatttgtcc
ggaagggaggaggaagttcgtgcacctggagcttccattgaggtgcaagttgaagcctgc
caaactcagatgtcagaacctgctctatgtgatgatcagttggaaaattcaaataattgc
gctaaatatgatttgcctgcacctgaaaagttactctctgcaccagaaggacctctcaat
aaaccaagtgatctgctgggcaactctaccccagacaaagaagtactagcagagaatgat
gaaattgatgctggaaccaaactcatttcaggaaaaaaacgaagtttaactgaaagtaca
ttaactatagagagtataaactcagttgaatcatttggaaggcctggatcaaggagaact
gcagattcagttcctgatgatgatgacttgttgtcttctattctagttggaagatcttcc
gttttcaagatgaaaccgactcctcgtcttgaagttgcatcaatgaaacgtgcacgatct
gcaccaagatcacgtgtcaccaagagaaaagttcttatggacgatactatggtcttacat
ggcgatacaatacggcagcagttggtaaatactgaagatatacgccgcatacgcaagaaa
gcaccttgcactcgccctgaaatttcattgattcagagaaaattcttggaagatgaaatc
tttagtgaacctatatttactggtatctcgggtgacttggcatctttgcacagtgagtcc
tatgatctaagcagtattaggatttctgaaggcgaggaaaaccatgcatcatctgaagta
gctaagaacccagagtgttcagttaaacctaatattgctgaaggtggaactgaagggagt
tctgtgcttgtgattcttggaaatgacaagcaagcacgatcttctggcactctaaatgct
cagcaggatagctatgctgttgatgatgtacctcaacttctgcaacatgaaccttttggt
gggatcaccaaaatggaaattgacagagttaatattgaagttgctaatgcagcaaatcat
tctgttctgactgagttacgggtatcatcccttactgatcttgttactggagatgccggt
aacatcatagctggggaggtaaccaacaccatggatggttccatcttaaacaatgtgaca
tgccttctacctgatcaaaagatgggcactcagcctggagaggatgcttctgaatcggat
atgagaaatgacaaagtatctcatcctactgaagttttagaacatgatgttgaaggtatc
tttgcaactgaaactgggtcaaaggctactgatgagttattgttagaagaaagtacaacc
aatacttcagttgaggttagtatgacagactacccttcacctgttgggaatggaactgat
tttcgtgcaactatagaaactggtgagtctgtgaatgtcgctcaaaatgcatacgaaact
ggacgtggtaaggctggtgtagcagatgagattcaagttgaggatgcagtcttgtatcat
gatgacaaaggcactatctgtaaggatagcaaagaatgtaaactggattctacgtattca
gaaaaggtccatacggctctgaaaaatacttcattacttgatggagaaactccaatcttt
caggaagttgatgcagtcaatgaggaaatgatctctcttgcagataatcgagctgaacgt
gaggatgttgcagttgtaaatgatacagaatttctgaatgtagatgataatgagctaggt
gatgatgatgaagatgacatgccatgtggtgatgaaggtcgtcttcttgaaaatagtgga
tggtcttctcgtaccagggctgttgccaagtatctccagaaattatttgaggatgaagct
gtaaatggacaaaaagtagtttctatggacggtctattgggtcgtaaaacaagaaaagaa
gcatcgagaatgttttttgaaacactggttcttaaaacaagagattacatccatgtggaa
caggtgaaaccctttgacaatatctgtataaagcctcgagcaaagctcatgaaatcgagt
ttctga
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