KEGG   Hibiscus syriacus (Rose-of-Sharon): 120171453
Entry
120171453         CDS       T09559                                 
Name
(RefSeq) histone deacetylase 19-like
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
hsyr  Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr03082  ATP-dependent chromatin remodeling
hsyr03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:hsyr00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    120171453
   03083 Polycomb repressive complex
    120171453
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:hsyr03036]
    120171453
Enzymes [BR:hsyr01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     120171453
Chromosome and associated proteins [BR:hsyr03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     120171453
   HDAC complexes
    Sin3A-HDAC complex
     120171453
    BRAF-HDAC complex
     120171453
    REST complex
     120171453
    SHIP complex
     120171453
    MiDAC complex
     120171453
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     120171453
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    120171453
  Chromatin remodeling factors
   NuRD complex
    120171453
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 120171453
NCBI-ProteinID: XP_039035092
LinkDB
Position
Unknown
AA seq 473 aa
METGGNSLPSGADGVKRKVCYFYDPEVGNYYYGQGHPMKPHRIALLAHYGLLQHMQVHKP
FPARDRDLCRFHADDYVNFLRSVTPETQQDQLRQLKRFNVGEDCPVFDGLYSFCQIYAGG
SVGGAVKLSHGLCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHQRVLYVDID
IHHGDGVEEAFYTTDRVMTVSFHKFGDYFPGTGDIRDIGYSKGKYYSLNVPLDDGIDEES
YHCLFKPIIGKVMEVFKPRAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSFNVPLL
LLGGGGYTIRNVARCWCYETGVALGMEVDDKMPQHEYYEYFGPDYTLHVAPSNMENKNSL
RLLEEIRNRLLDNLSKLQHSPSVHFQERPPDTELPKADEDQDDGDERWDSDSDMDVDEDR
KLIPSRVKREVIGPDTKDPVQKGSVEQPRGSVTDETGVDVSPMPIDEPTVKVE
NT seq 1422 nt   +upstreamnt  +downstreamnt
atggagactggagggaattcattaccttcgggagccgacggcgtgaagaggaaggtgtgc
tatttctatgacccggaggtggggaactattattatggccaaggtcaccctatgaagcct
cacagaattgcccttctagcacactatgggctgcttcagcatatgcaagttcacaagccc
ttccctgccagggatagggatctttgccgcttccatgccgatgactatgtgaactttctc
cgcagcgtaacccctgaaacgcagcaagatcagctcagacagctcaagcgcttcaatgtc
ggtgaggactgtcccgtctttgatggcctttactccttctgtcaaatttatgcaggtggc
tccgttggcggagctgtcaagttaagccatggtctatgtgacattgccattaactgggct
ggtggcctgcatcatgcaaagaagtgtgaggcgtccggcttttgttatgtcaatgatatt
gttcttgccattctggaacttcttaagcagcatcagcgtgttctatatgtcgatattgat
atccaccatggagatggtgtggaggaggcattttatacaactgacagggtcatgactgtt
tcatttcataaatttggagattattttcccggtacaggtgatatacgtgatattggatat
tcaaaagggaaatactattccctcaatgttcctttggatgacgggattgatgaagagagt
tatcattgcttgtttaagccaatcattggtaaagttatggaagtttttaagccccgtgct
gtagttcttcaatgtggtgctgactctctgtctggagataggttggggtgtttcaatctt
tcaatcaagggtcatgcggagtgtgttaaatttatgagatcattcaatgtcccgttgttg
cttctaggtggtggtgggtataccattcggaatgttgctcgctgttggtgctatgagacc
ggagttgcacttggaatggaagttgacgacaagatgcctcaacacgagtactatgagtat
ttcggtccagattatactcttcatgttgcccctagtaacatggaaaacaaaaactcactc
cggttacttgaagaaattcgtaataggctactcgacaatctctcaaagcttcagcattcg
ccgagcgtccattttcaagaaaggccacctgatacggagcttcccaaggctgatgaggat
caggatgatggagatgaaagatgggactcggattcggacatggacgttgatgaggaccgt
aagctcattccaagcagagtaaagagggaagtgattggaccagatacgaaagatccggtc
caaaaaggatcagtcgagcaacctaggggatctgtgacagatgagactggtgtagatgtc
agtccaatgccgatcgatgaaccaactgtgaaagtcgagtaa

DBGET integrated database retrieval system