Hibiscus syriacus (Rose-of-Sharon): 120171644
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Entry
120171644 CDS
T09559
Name
(RefSeq) RNA-binding protein 39-like isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hsyr03041
]
120171644
Spliceosome [BR:
hsyr03041
]
Common components
Common spliceosomal components
General mRNP proteins
120171644
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_7
Motif
Other DBs
NCBI-GeneID:
120171644
NCBI-ProteinID:
XP_039035252
LinkDB
All DBs
Position
Unknown
AA seq
582 aa
AA seq
DB search
MDFDEYEYLEKSVENPEPQKAKKEDGNGRVDNVKSDERSRSRISKHKRGERAYESDDDHS
HSKRSKSRDEPLHDLDRRKERGSSRHRSHSRDGEMDRHRSSREHRVKERDKEESNGRDKE
KERERDRRERDRERDREIEPSIRSKSRPEREREKSRDREFREREKEREPRERDRESRRYK
DKKEDAAEAEVDPERDQRTVFVYQISLKANERDVYEFFSRAGKVRDVRLIMDRSSRRSKG
VGYVEFYDVMSVPMAIALSGQPLLGQQVMVKPSEAEKNLVQPTTSVAAGQTGQFAAGGRR
LYIGNLHFNITEEQLRQVFEPFGNVELVQLPPDETGHCKGFGFVQFARLEDAKNALNLNG
QLEIGGRVIKVSTVTDQGPWQDAGTNAADFDDDEGGLSLNSSSRALLMAKLDRSGTASSI
TGSIGMPINSTGLGATTAPILGAAPLAQSLIPPTLQASIPTISGLPGGLQIHTNGIPIID
TVGVPSECLLLKNMFDPGLETEPDFDLDIKEDVKEECSKFGKLKHIYVDRDSAGFVYLRF
EDVQGAKNAQRNLHGRWFAGKMITAAYMMPQTYEAKFPDSNK
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atggattttgatgaatatgagtatttagaaaagtcagttgaaaatcctgagcctcaaaag
gcgaagaaggaagatggtaacggcagagttgataatgttaaatctgatgagaggagtcgt
agtcggatttcgaagcacaagaggggagagagagcctatgagagtgatgatgatcatagt
cactccaaacgctcaaaatcacgtgatgaaccactgcatgatcttgaccggcgcaaggaa
cgaggctcatctcgtcacaggtcacattctagagatggtgagatggataggcacaggagt
agcagagaacacagagtcaaggaaagggacaaggaggagagtaatgggagagacaaagag
aaggaacgtgaacgagataggagagaacgtgatcgtgagagggacagggagatagagccg
tcaattagaagcaagagtcgaccagaaagagaacgtgagaagagtcgggaccgtgagttt
agagaaagagaaaaagagagagagcctagggaacgggacagagaaagcaggaggtataaa
gacaaaaaggaagatgcggcagaggctgaggttgatccagaaagggatcagaggactgta
tttgtgtatcagatatccttgaaggctaatgaaagagatgtttatgagttcttctctagg
gctggcaaggttcgagatgttcgcctcataatggatcgaagttcaagacgttccaaagga
gttgggtatgttgagttctatgatgtaatgtcagtccctatggctatagcactttctgga
cagcctcttcttggccaacaggtgatggtgaaaccatcagaagctgagaagaatcttgtt
cagcctactacatctgtggcagctggacagacaggtcaatttgctgctggggggagaagg
ttgtacattgggaacctacatttcaacattacagaagaacaactacgtcaggtttttgaa
ccttttggtaatgtggagctggtgcagttgcccccggatgaaactggtcattgtaaaggt
tttggttttgtccagtttgcccgactggaggatgctaagaatgccttgaatttgaatgga
cagctggagattggaggtcgagtaatcaaggtatcaactgttactgatcaaggtccatgg
caagatgctgggacaaatgcagctgattttgatgacgatgaaggtggcttgtctctgaat
tcatcatctcgagcacttctcatggcaaagttggaccgcagtggcactgcatctagtatt
actggctccataggcatgcctattaatagcaccggccttggtgctacaacagcaccaatc
ctcggtgctgcacctttggcacaatccctcattcctcctactctacaggcctctattcct
accatttctggacttccaggtggtctacaaatccatactaatggcatccctattatcgac
acagttggagtccctagtgaatgccttttattgaagaatatgttcgatccgggtctcgag
acggaacccgattttgatttggatatcaaagaagatgttaaagaagaatgttcaaaattt
ggaaaattgaagcatatttatgtagacagggacagtgctgggtttgtctacttacgattt
gaagatgtgcaaggtgcgaaaaacgcacaacggaacttacatggaagatggttcgctgga
aaaatgatcaccgctgcatacatgatgccacaaacctacgaggcgaagtttccagatagt
aacaaatag
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