Hibiscus syriacus (Rose-of-Sharon): 120171834
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Entry
120171834 CDS
T09559
Name
(RefSeq) vacuolar-sorting protein BRO1-like
KO
K12200
programmed cell death 6-interacting protein
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr03250
Viral life cycle - HIV-1
hsyr03272
Virion - Hepatitis viruses
hsyr04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
120171834
03272 Virion - Hepatitis viruses
120171834
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
120171834
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hsyr04131
]
120171834
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hsyr04147
]
120171834
Membrane trafficking [BR:
hsyr04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT associated proteins
120171834
Exosome [BR:
hsyr04147
]
Exosomal proteins
Proteins found in most exosomes
120171834
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRO1
ALIX_LYPXL_bnd
DUF8443
Motif
Other DBs
NCBI-GeneID:
120171834
NCBI-ProteinID:
XP_039035402
LinkDB
All DBs
Position
Unknown
AA seq
877 aa
AA seq
DB search
MTATSSSATATNIMLAIYEKKTNSIDLYRPLRQYISYTYSEREAVNLEDDLDTVKTLRSD
IERVPDPSPTTRRDLLVSYFKALCLIETRFPISPDRDHINSIQFTWFDAFKQKQKAVQQN
IHLEKAAILFNLGAAYSQLGLSYDRTTVEGRRLASHAFIAAAGAFAYLRDNASTKASMGN
STTVDLSVECAGMLERLMLAQAQECVFENTIAKGSTPGVCSKISRQVGLYYEEALAALNT
APLKDHFEKAWITHVQLKAALFYAEACYRYGLELHEKEEIAEEIARLKSGVSALTEAKKS
SKGAPAQILDAISKLEVNLNRNLERAMKENERVYLMRVPSPSSLAALPAFSMVKSMQMND
VLDASKEKMFASLVPDSSAKALSRYTEMVDEVIRTQAEKLQQGSELTRVRLKEMDLPDSI
LALEGNFNLPEDLKNEVEKVQASGGPAGLEAELQQLRDLRRVNQELLVQTEELLQKEAAE
DAQFRSQFGTRWTRPQSSTLTKTLQERLNKFAANLKQAGESDVRIERSVREHFALMSILN
HRPIEAALPSLSRPIMSLDANEDAIVGALKQSLRQLETLGAQRAGLEDMLKEMKRKDDIL
PKLMTSTGSYEDLFRKEIAKYDHICEEIAQNIEAQEQLLMQIQAQNEEFGAVFNLEDYKA
SREKCYKQIQAALAKCKEIKDNINEGLKFYVTLQDALNNIKQQCSDFVMTRNIQCREMME
DVQRKMAGFSFQERESAGPYPSVGQPRPTPRPGSQQITEPQSISHPPPQIPYYRSAEQPM
HTYSHPPPPYTAPQQPPPYHVHSSTAAPYPPPSSTAPYPPPHALLRPPVGHEYGQPAYPG
WRGPYYNAPAEQPGSLPRPPYTTPNPYHPHQSGYYKQ
NT seq
2634 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcgacatcctcctcggcgacagccaccaacatcatgctagcaatctatgagaag
aaaaccaactcgatcgacctctaccgtcccctccgtcaatacatctcctacacatactcc
gaacgcgaagccgtcaacctcgaagatgaccttgacacagtcaaaaccctccgctccgac
atcgaacgagttccggacccatccccaacaacccgacgcgacctcctcgtctcttacttc
aaagccctatgcctaattgaaacccgcttcccaatttcccccgatcgagatcacataaat
tcaatccaattcacttggtttgatgcatttaaacagaagcaaaaggcggttcaacaaaat
atccatttagaaaaggccgcgattttgtttaatctcggcgcggcttatagccagcttgga
ttatcttacgataggactacggtggaagggaggaggctggcgtctcacgcgtttatcgct
gcagcgggggcgtttgcttacctcagagataatgcgtcgacaaaggcttcgatggggaac
agtacgaccgtggatctgtcggtggagtgtgctgggatgttggagaggttgatgttggct
caagctcaagagtgtgtttttgaaaatactattgccaaaggaagtactcctggagtttgc
tccaagatttctaggcaggttggattatactatgaggaagctttagctgcattaaataca
gctcctttgaaggaccattttgaaaaagcgtggattacacatgtgcagcttaaggcagct
cttttctatgcagaagcttgttataggtatggtttggagctgcatgagaaagaggagatt
gcagaagaaattgcacgcttgaagagtggtgttagtgctttaactgaggcaaagaaatca
tcgaaaggggctcctgcacagattctggatgcaattagcaagttagaagttaatcttaat
cgcaacctggagagggctatgaaggaaaatgaaagggtttatctgatgagggttccttct
cctagttctttagcagctctccctgcattttctatggtgaagtcaatgcagatgaatgat
gtgttagatgcaagcaaagagaagatgtttgcaagtcttgttcctgacagcagtgcaaag
gctctttccaggtatactgaaatggttgatgaagtcatcaggacacaggctgagaaattg
cagcaaggaagtgagctaacccgagttaggcttaaggaaatggacttgccagattcaatt
cttgctttggaagggaactttaatcttccagaagatcttaagaatgaggtagaaaaggtg
caagctagtgggggcccagctggtctggaggctgagttacaacaacttagggatctaaga
agggtgaatcaggaattgctggtacagactgaggagcttttgcagaaagaagctgcagag
gatgctcagtttagaagtcagtttggaacccgatggactagaccacagtccagcactctg
acaaagactttgcaggaaaggttaaataaatttgctgctaacttaaaacaagctggagaa
agtgatgtgcgaatcgagcgctctgtgagagagcattttgcactgatgtccatccttaac
caccgaccgatagaagctgccctaccaagtctttcaaggccaataatgtctttggatgcc
aatgaagatgcaatagttggggcccttaagcagagcttgagacaattagagactcttggt
gctcagagggcaggcctcgaggatatgcttaaagagatgaaaagaaaggatgacatatta
cctaagttgatgacatccactggctcctatgaggatcttttcaggaaggagatagcgaag
tatgatcacatttgtgaggaaattgcccaaaacattgaggcacaagaacaattattgatg
caaattcaggctcagaatgaagaatttggtgccgtatttaatcttgaagattataaagca
tcacgagagaagtgttacaaacaaattcaagctgctttagcaaagtgtaaagaaatcaag
gataatattaacgagggactgaagttttatgttactcttcaggatgcactcaataatatc
aagcagcaatgcagtgattttgtgatgactcgaaacatccagtgtcgagaaatgatggaa
gacgttcaaaggaaaatggcaggtttcagcttccaggaacgtgagagcgcaggtccatac
ccttcagttggacagccccggccaactccaagacccggttcacagcagataacagaacct
cagagtatatcccatcctccaccgcaaattccttactataggtctgctgagcagccaatg
cacacgtacagtcatccgcctcctccttatactgccccacagcaaccgcctccttaccat
gttcactcatctactgctgctccttatcctcccccatcttccactgctccttatcctccc
ccacatgccctgttacgtccgccagtcggccatgaatatggtcaacccgcctatcccggg
tggcgtgggccttattataatgcccctgcggagcaacccgggtctcttcctcgaccacca
tataccactccaaatccgtatcatccccaccaaagtggttattataagcaatga
DBGET
integrated database retrieval system
