Hibiscus syriacus (Rose-of-Sharon): 120172040
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Entry
120172040 CDS
T09559
Name
(RefSeq) paired amphipathic helix protein Sin3-like 2
KO
K11644
paired amphipathic helix protein Sin3a
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hsyr03036
]
120172040
Chromosome and associated proteins [BR:
hsyr03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
120172040
REST complex
120172040
Heterochromatin formation proteins
Other heterochromatin formation proteins
120172040
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAH
Sin3a_C
Sin3_corepress
PAH_ZNF598
Motif
Other DBs
NCBI-GeneID:
120172040
NCBI-ProteinID:
XP_039035544
LinkDB
All DBs
Position
Unknown
AA seq
1376 aa
AA seq
DB search
MKRARDDVYSGSQFKRPFSSFRAESYGKNQMPGGSSGPGGGGVEVGGGGGGGGGGGGGGG
GSMPQKLTTNDALTYLKEVKEMFQDQKEKYDMFLEVMKDFKAQRTDTVGVIVRVKELFKG
HNNLIYGFNTFLPKGYGITLDEDEAPPRKTVEFDEAISFVNKIKKRFQHDEHVYKSFLDI
LNMYRREHKDINEVYTEVASLFEDHPDMLEEFTRFLPDSSAAPMTQQVLYGRNSTQRNNE
RSSATTTLRHIQTDKQRRRDRIITSHADRDLSVDRPELDDDKAVMKIQKEHRKRMEKDNR
DQRIRDHDDPEHENNWDFNLNRFADKKRSGRKVEGFASYDDRDTFKSMCNRGFVFCEKVK
ERLCSSDDYQAFLKCLNIYSNGIIKRNDLQNLVTDLLGKYPDLMNEFNKFLERCENTDGL
LAGVISKKSLTLDGHTSRPLEEKDRELKREIDGAKEKERYKEYMGKSIQELDLSNCQNCT
PSYRLLPDDYPIPIASQRSELGASVLNDYWVSVTSGSEDYSFKHMRRNQYEESLFRCEDD
RFELDMLLESVSSTAKRVEDLLNSINENKINMNCSFRIEEHFTVLNLRCIERLYGDHGLD
VMETLRKNPAIALPVILTRLKQKQEEWTKCRSDFNKVWTEIYSKNHYKSLDHRSFYFKQQ
DSKNLSAKSLLAEIKELKEKNQKDDDVLMASVAGHRQPLASHLEYGYLDFDIHEDLYKLI
EYSCEEMCSTKEQLNRVMRLWTTFLEPMFGVPPRHNGREGTDGAGKAQNPALSCTALNVA
ESDGSPGADATVNSGQLKAASDGDKNSSSEVTNSCRNGLTNGEILTREHSVRASRDDSRL
EKETKFTADKKPGIHVHANGMETVNNHSRNNVEGASGKGIAASRPSSRVAGEAHESEANA
DIVHSSEGVGVTKHALLVNGMPTDGSNASRCHEESARFSRIEKEEGELSPASEFEEDNFV
AYGDTCPKVVPKAKRGVENRQHRSGNGGDLHSVDAGGENDADADDEDSENASEAGDNASG
SESAGDECSREENEEEEVEHDEADGKAESEGEAEGTADTHVGDGTSLSFSERFLFTVKPL
SKHVRAILPEDDRNNSWGFYANDDFYILFRLHQILYERILSAKTNTAAAEIRCKHPKDAS
SSDLYARFMDALYNLLDGSTDNSKFEDECRAIIGNQSYVLFTLDKLIFKLVKQLQAVAAD
EMDNKLLQLFDYEKSRKHWKAMDSVYYENARVLLHEENIYRLKYSSLPSRLSIQLMDNVI
EKPEAFAVSMEPNFSAVLHNDILSVYPSKKEPHGIILKRNKKYANLDEFAATCLAMEGVE
LFNGLENKIACNSYKISHVLDTEDFFYRRRTSSRHRSSCNNQARIRRFHRFLSSSQ
NT seq
4131 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgagcaagagatgatgtatattctggttctcaatttaaacgtccgtttagttcc
tttagggctgaatcgtatgggaaaaaccaaatgcctggtggaagtagtggtcccggtgga
ggaggtgttgaagtaggaggaggaggaggaggaggaggaggaggaggaggaggaggagga
ggaagtatgccacagaaactgactacaaatgatgccttaacgtatctaaaggaagtcaag
gagatgtttcaggatcaaaaagagaagtatgacatgttccttgaagtcatgaaggatttc
aaggcacaaaggactgacacagttggtgtcattgtccgagtgaaagagttattcaaaggg
cataacaacttgatttatggatttaataccttcctgccgaaggggtatggaattaccctt
gacgaagacgaggctcctccgagaaagacagttgaatttgacgaagcgatcagttttgta
aacaaaataaagaaacgtttccaacatgatgagcatgtttataaatcatttctggatata
ttgaatatgtaccggagggagcacaaggacataaatgaggtctataccgaggttgcttct
cttttcgaagaccatcctgatatgcttgaggagttcacaagatttttaccagattcttca
gcagctcctatgacacagcaagttctatatggtcgaaactcaactcagcgcaataatgag
cgaagctctgctacaaccaccttgcggcatatacaaacggataagcaacgtcggagggat
agaattattacttcccatgctgatagggatctcagtgtcgatcgccctgaactggacgat
gacaaagcagtgatgaaaatacaaaaagaacatagaaaacgcatggaaaaggacaatagg
gatcagagaatacgtgatcatgatgatcccgagcacgaaaacaattgggattttaacttg
aatcgttttgccgacaaaaagagatctggaaggaaggttgaaggatttgcttcttatgat
gacagggatacttttaaaagcatgtgcaaccgaggttttgtattctgcgagaaagtgaag
gagagactatgcagctcagacgactaccaggcattcttaaagtgccttaatatttatagc
aatggaataatcaaaagaaatgatttgcaaaacttggtgactgatttacttggaaagtac
ccagatcttatgaatgagttcaataagttcttggagcgttgtgagaatacagatgggctc
cttgccggtgttattagtaaaaaatcacttactcttgacggacatacgtccagaccatta
gaggaaaaagatagagaactgaaacgtgaaattgatggagctaaggaaaaggagagatat
aaggagtatatgggaaaatcaatacaggagcttgacctttctaactgccaaaattgtact
ccaagctatcggcttcttccagatgattacccaatacctatagcaagtcagagatccgag
cttggcgctagtgtgctgaatgattattgggtatctgtcacttcaggaagtgaggattat
tcttttaagcacatgcgccgaaatcagtatgaagagagcttgttcagatgtgaggatgat
aggtttgaactggatatgttgttagaatctgtgagctcaacggccaagcgtgtcgaggac
ttgctcaacagcattaatgaaaataaaatcaatatgaattgctcatttcgtatagaagaa
cactttactgttctgaatttgaggtgcatcgagcgtctatatggtgaccatggtcttgat
gtaatggaaacattacgtaaaaatcctgcaattgcattgcccgtaattttaactcgcctg
aagcagaagcaagaggagtggacaaagtgccgttcagacttcaacaaagtttggactgaa
atctattcgaaaaaccattacaaatcacttgatcatcgcagcttctatttcaagcagcag
gattcaaagaacttgagtgcaaaatctttactggctgaaatcaaagagttgaaagagaag
aaccagaaagatgacgatgttcttatggctagcgttgctggtcaccgacaaccccttgct
tcacaccttgaatatggatatttggattttgacattcacgaggacttatataagcttatt
gaatattcatgtgaagagatgtgttcaacgaaagaacagttaaaccgagttatgaggctc
tggaccactttcctggagcccatgtttggtgttcctcctagacataatggcagagagggt
actgatggtgccggtaaagcgcagaatcctgctttaagctgcactgctttgaatgttgct
gaaagtgatggaagtcctggagctgatgctactgtaaattccgggcaactaaaggctgcc
agtgatggagacaagaacagttcatctgaagtaactaattcttgcaggaatggtttgaca
aatggggaaattttaaccagagaacattcggttcgcgcctcgagagatgattcaaggcta
gagaaagagaccaaatttacagctgataaaaagcctggaatccacgtgcatgcaaatgga
atggaaacagtaaataatcacagcagaaacaatgttgaaggggcatcagggaaaggcata
gctgcatctagacctagtagcagagttgctggtgaggctcatgaatccgaagctaatgct
gatatagtacattcttcggagggtgttggtgtaacaaaacatgctttattagtaaatgga
atgcctacagatggctctaatgccagtagatgtcacgaagaatccgctcgtttctcaaga
attgaaaaagaagaaggtgaattatcacctgccagtgaattcgaggaggataattttgtt
gcttatggtgatacctgtccaaaggttgtgccaaaggcaaagcgtggtgttgaaaacaga
cagcaccggtctggaaatgggggagacttgcattccgtggatgccggtggagaaaatgat
gcggatgctgatgatgaggatagtgaaaatgcctcggaggctggtgacaatgcatcgggc
agtgagtccgcaggcgatgaatgctcccgtgaagagaatgaagaggaagaggtcgaacat
gatgaagctgatggtaaggccgagagtgaaggcgaagctgaggggacggcggatacacat
gtgggagatggcacgtccttgtcattttcggaacgtttcctctttacagtgaagcctctt
tcaaagcatgtacgagcaattctacccgaagatgatagaaacaattcttggggtttttat
gcaaatgacgatttctacatccttttcagacttcatcaaatcctttatgaaagaatactg
tcagcaaaaacaaatacagcggctgctgaaataaggtgcaaacacccaaaagatgctagt
tcttcggatttatatgccagatttatggatgcactttacaatctgctcgatggatcaact
gataattcaaagtttgaggatgaatgccgagctataataggaaaccagtcatatgtgttg
ttcacattggacaagttgatatttaaattggttaagcagcttcaagctgttgcagcggat
gagatggataataagcttcttcaattgtttgactatgaaaaatcccgaaaacactggaaa
gcaatggattcagtatattatgagaatgcacgcgtcctccttcacgaggagaatatttat
cgattgaaatattcgtctctgccatctcgtttatctattcagttgatggacaatgtcatt
gaaaagcccgaagcatttgctgtttccatggaacctaatttttcggctgttttgcacaac
gacattctgtcggtctatcccagcaagaaggagccacatggcattatcctaaagagaaac
aaaaagtatgcaaatttggatgaatttgctgctacctgcttggccatggaaggtgttgaa
ctgtttaatggtttagagaacaagatagcctgcaactcatacaagatttcacacgtgttg
gacaccgaagatttcttctatcgtagaagaacttcatcacgacacagatcttcatgcaat
aatcaggctagaatacgacggttccatagatttttatcatcttcacaataa
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