Hibiscus syriacus (Rose-of-Sharon): 120172075
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Entry
120172075 CDS
T09559
Name
(RefSeq) polygalacturonase-like
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr00040
Pentose and glucuronate interconversions
hsyr01100
Metabolic pathways
Module
hsyr_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
120172075
Enzymes [BR:
hsyr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
120172075
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_hydro_28
Beta_helix
Pect-lyase_RHGA_epim
NosD
Motif
Other DBs
NCBI-GeneID:
120172075
NCBI-ProteinID:
XP_039035572
LinkDB
All DBs
Position
Unknown
AA seq
364 aa
AA seq
DB search
MHELPPPLDLSYDRSDLPLLDAWKEACGSTTPSTIVIPEGTYLLSQATLEGPYKAPIEHQ
LEGNVKAATDPKAFKEPKWVSFLHVENFKLFGGGAFDGQRTASYKREGCEKHDFCSNLPI
ISKHNVRFDYLTNAMVQGITLRDSKQFHANVLGCKNITFEHEIVSAPKDSSNTDGIHIGR
SDGVKIIDTYIKIGDDCILIGDGAKNLDITGVTCGPGHGISIGSLGKFANEEPVEGIKVS
KCTLTDTSNGVRIKTWAGQFPGTASDIHFEDITVKNVSCSVLIDQKYCPWNKCKMDEESN
VKLSNISFKNIHGTAALPEVVKLVCSGTFPCENVELADFDITFSGPDGPAKSECKNVKPI
VTGK
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atgcatgagcttccaccaccactggatctatcatacgatcgttcagatttgccattgttg
gatgcttggaaagaagcttgtggttcgacaactccatcaacaattgtgattcctgaaggg
acatatttgttaagtcaagcaacgctagaaggtccttacaaggctcctattgagcatcaa
cttgagggcaatgtaaaagcagcaactgatcctaaagctttcaaggagcctaaatgggtt
agcttccttcatgttgaaaacttcaaattgttcggtggaggagctttcgatggacaaaga
accgcttcttataagagagaaggttgcgaaaaacacgacttctgtagtaacctccccatc
ataagtaaacataatgtaaggtttgattatttgaccaatgcaatggtacaaggtataact
ctcagagatagcaaacagttccacgctaatgttttgggatgcaaaaacattactttcgaa
catgaaattgtatctgcacctaaagatagctcaaacacagatgggattcatatcgggaga
tcagatggggttaaaattatagacacatatatcaaaattggtgatgactgtattttaatt
ggggatggtgccaaaaatctggacatcacgggagtaacttgtggacccggacatggcatc
agtatcggtagtcttggaaagtttgcaaacgaagaacccgttgaaggaattaaagtgtcg
aagtgtaccttgactgatacttcgaatggtgttagaatcaagacttgggcaggtcaattt
cctggcacagcatcggatatacattttgaggatatcacagtgaagaatgttagttgttcc
gtcctgattgaccaaaaatactgcccatggaataaatgcaaaatggatgaagaatcgaat
gttaaactaagtaacatcagcttcaagaacattcatggtacggctgcgcttccagaagtt
gtcaaactcgtttgcagtggtacttttccatgtgaaaatgtagaactcgccgactttgac
attacgtttagtggaccggatggacctgcaaaatccgaatgtaaaaatgttaaaccaata
gttactggcaaataa
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