Hibiscus syriacus (Rose-of-Sharon): 120172369
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Entry
120172369 CDS
T09559
Name
(RefSeq) serine/arginine-rich-splicing factor SR34-like isoform X1
KO
K12890
serine/arginine-rich splicing factor 1
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120172369
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hsyr03041
]
120172369
Spliceosome [BR:
hsyr03041
]
Common components
Common spliceosomal components
SR proteins
120172369
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_occluded
RRM_7
RRM_YTH1
Motif
Other DBs
NCBI-GeneID:
120172369
NCBI-ProteinID:
XP_039035767
LinkDB
All DBs
Position
Unknown
AA seq
324 aa
AA seq
DB search
MSSRSSRTLYVGNLPGDVREREVEDLFYKYGSIVHIDLKIPPRPPGYAFVEFEEARDAED
AIRGRDGYDFGGQSLRVELAHGGRGRSSSDRHSSYGGGRGRGRGPAKRSEYRVLITGLPS
SASWQDLKDHMRRAGDVCFSQVFRDGGGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSRA
YVRVKEYDSKRDSSRSPSRGRSLSRSQSHSRSRSRGRSTSRSKSPRTKPSRKSPAKSRSR
SRSSPASRSRSFSGSRSRSRSPLPSRGKGRSKSPKRRSVSGSPKRHSVSKSPKRRSVSKS
PKRRSVSRSPSGSRSRSRSKSLSR
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgagtagccgttcgagcagaactctctatgttgggaatcttcctggagatgttcgcgag
agggaagtggaagatttgttttacaagtatggttccatagtacatattgacctgaagatt
ccaccaagacctccaggttatgcttttgttgagtttgaagaggctcgagatgctgaagat
gctattcgtggtcgtgatggctatgattttggaggacagagtttgcgggttgaacttgca
catggtggtcgtgggcgttcatcttcagatcgtcacagcagttatggaggtgggcgtggg
cgtgggcgtggacctgccaaacgttctgaatatcgtgtgttaatcactggattgccatct
tcagcttcatggcaggatcttaaggatcacatgcgtcgagccggggatgtttgtttttcc
caagttttccgtgatggtggtgggacaacgggaattgtggattacaccaattatgatgac
atgaagtatgctatcaagaaacttgacgactctgaatttcggaatgccttttctcgggct
tatgttcgggttaaggaatatgattctaagagagattcctctagaagtcccagtcgtggt
cgttctctctcaagaagccaaagccatagtcgcagtcgctctcgtggtcggagcactagc
cgcagcaaatctcctagaaccaaaccttcacgcaagtcacctgcaaagtcaagatcaagg
tctcgttcctcccctgcatcaaggtctcgttctttttcaggatctcgatcaagatcaaga
tctccgttgccttctcgcggaaaaggaaggagcaagagtcctaaaaggcgcagtgttagc
gggagtcctaaaagacacagtgttagcaagagtcctaaaagacggagtgttagcaagagt
cctaaaagacggagtgttagcaggagtccaagtgggagtagaagcaggagtaggagcaag
agtttatcaaggtaa
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