Hibiscus syriacus (Rose-of-Sharon): 120172384
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Entry
120172384 CDS
T09559
Name
(RefSeq) LOW QUALITY PROTEIN: transmembrane E3 ubiquitin-protein ligase FLY1-like
KO
K23788
transmembrane E3 ubiquitin-protein ligase [EC:
2.3.2.27
]
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hsyr04121
]
120172384
Enzymes [BR:
hsyr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120172384
Ubiquitin system [BR:
hsyr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
120172384
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-rbx1
zf-RING_11
zf-RING_5
zf-C3HC4_3
zf-C3HC4
DUF2921
PHD_NSD
zf-ANAPC11
zf-RING_UBOX
zf-RING_16
zf_RING_Vps8
Prok-RING_4
zf-P11
NiFe_hyd_3_EhaA
Motif
Other DBs
NCBI-GeneID:
120172384
NCBI-ProteinID:
XP_039035784
LinkDB
All DBs
Position
Unknown
AA seq
542 aa
AA seq
DB search
MVWFCYVKASGGLRPIREXARSWGDEWLFVRKDESELGPFHAWNITGTYRGNWQFLESMN
SSSKFADFRKSAGDSVIELVSTPTKITGVHYVQGVIIFHDVFDNKHNIGGAQIRVEGVYI
WPFRQLRMVANSGKEGELSQEEDYILSNPYHLLGVFSSQVFQDSPRDKIWRRKYSPIYEM
EKHCNIEIAAQISRISSSQNDGDHDRYHIEGLMESPTVDDDGDCFSPILLNATSVNIEVY
YNKAVNYTLMVTFVSFLQVLLLIRQMEHSNTQSGAAKVSILTIGLQAIMDAYLCLLHLTA
GILVESLFNAFATAAFFKFVVFSIFEMRYLLAIWKASRPMNNGEGWETMRRELSVLYSRF
YGILLGGILIMYEFHNFLRPILLLLYSFWIPQIITNVIRDSRKPLHPHYILGMTVTRLAI
PLYIFGCPHNFMRIEPDKSWCICLGVFIGLQASILLLQHYLGSRWFIPRQILPEKYSYYR
RFDPETNHTTDCVICMTAIDVTQRSRDCMVTPCDHFFHSGCLQRWMDIKMECPTCRRSLP
TA
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atggtttggttttgttatgttaaagccagtggcggattgagaccaataagggagnnggct
cggtcatggggggatgagtggctgtttgttagaaaagatgaaagcgaattgggtccattt
catgcatggaacataacaggaacttatcgaggcaattggcaatttctggagtctatgaat
agctcttccaaatttgccgatttcaggaaatcagctggtgattcagtcattgaattagtt
agcacaccaacaaaaataactggtgtacattatgttcagggtgtaattattttccatgac
gtgtttgataacaaacacaatattggtggtgctcagataagggtagagggtgtatatata
tggcctttcagacagcttcgaatggtagctaacagtggaaaggagggagagctgagtcag
gaagaagattatattttgtccaacccataccatttgcttggagttttctcatctcaagtg
ttccaagattctccacgtgacaaaatatggagaagaaaatattcaccgatttatgagatg
gagaaacattgcaatatagaaattgctgcccaaatttcgcgcatctcatcaagccaaaat
gatggagatcatgatcgttatcacatcgaaggattgatggagagtcctacagtggatgat
gatggagattgtttctcacctatactattaaatgcgacttctgtcaatattgaagtctat
tacaacaaagcagttaactacaccttaatggtcacctttgtctctttccttcaagtcctt
ctgttaatcagacaaatggaacatagcaacacacaatcgggagctgcaaaagtttcaatt
ttaacgattggtctacaagctatcatggatgcttatctttgcctcttacatctcactgca
ggaatactggttgaatccttatttaatgcttttgcaacggcggcattcttcaagtttgta
gtcttctccatttttgagatgaggtaccttctcgcaatatggaaggcaagtaggcctatg
aataacggtgaaggctgggagacaatgaggcgcgagctatctgttctatatagccgtttc
tatgggatccttttaggaggcattttgatcatgtatgagtttcataattttttgcggccc
atacttctccttctgtactccttttggatacctcaaataatcaccaatgtcattcgtgat
tcaagaaaacctttgcatcctcattacatcttaggcatgactgttactcggctagcaatt
ccattatatatatttggatgtcctcacaacttcatgcgaatcgagcctgacaagagctgg
tgtatctgtttgggtgtattcattggacttcaagcatccattcttcttcttcagcactat
cttggatctcgatggtttattcctcgtcagatactacccgagaaatatagctattacaga
agatttgatccagaaacaaatcataccacagactgcgtcatttgtatgactgccattgat
gttacgcaacgttcaagagattgcatggtaacaccgtgcgatcatttctttcattccggt
tgtttgcaacggtggatggacataaagatggaatgcccaacttgccgccgttcgttaccg
acagcttaa
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