Hibiscus syriacus (Rose-of-Sharon): 120172547
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Entry
120172547 CDS
T09559
Name
(RefSeq) RNA-binding KH domain-containing protein PEPPER-like isoform X1
KO
K21444
poly(rC)-binding protein 3/4
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsyr03019
]
120172547
Messenger RNA biogenesis [BR:
hsyr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
120172547
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KH_1
KH-I_KHDC4-BBP
KH_2
KH_KhpA-B
KH_N4BP1_2nd
Motif
Other DBs
NCBI-GeneID:
120172547
NCBI-ProteinID:
XP_039035910
LinkDB
All DBs
Position
Unknown
AA seq
429 aa
AA seq
DB search
MEIADASENGSGMTQTTTATESDPSETTANNPAAEKWPGWPGHCVFRLIVPVTKVGSIIG
RKGELIKKMCEETRARIRVLDGAVGTPDRIVLISGKEEPEAPLSPAMDAAIRVFKRVSGF
PDNDTDAKAVGATFCSIRLLVASTQAISLIGKQGSLIKSLQESTGASVRVLSGEETASYV
AADERIAELQGEALKVLKALEAVVSHLRKFLVDQTVLPLFEKTHNSVGTQDLQAESRPEK
LSLLTASQSGIGIDLPIRRESLFLEHEKQFESRIPSSGISFFGQDPALSMVHSSSGLHRS
AVPIVTQIAQTMQIPFSYAEDIIGIGGVNIAYIRRTSGAVITVQESGGLSDEITVEIKGT
SIQVQLAQQLIQEFMSNHKDPITSSSGYRDTGYRSSFSQLGNTSSLSSQQPYGGYGGPSS
VSGYSTFRL
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atggaaatcgccgacgcgtcggagaacggttcgggaatgacccagacaacgacggctaca
gaatccgacccatcagaaaccacggccaacaatccagcagctgagaagtggcccggatgg
cccggtcactgcgtgtttcggctcatcgttccggttacgaaagtcggcagcataattggc
cggaaaggtgagctaatcaagaagatgtgcgaggaaacccgcgcccgtatccgcgtcctt
gatggcgctgttgggacgcccgatcgcattgtgctaatatctggaaaggaagaaccagag
gcacctctttcccctgcaatggatgctgctataagagttttcaaacgtgtctctggattt
cctgacaatgataccgatgctaaagcagttggagctacattttgttcgatccggttgctg
gtagcatctactcaagcaatcagtttgattggaaagcaaggctccttaatcaagtcatta
caagagagcactggtgcatctgtgagggtattgtcaggagaggaaactgcatcttatgtg
gcagcagatgagaggattgcagagttgcagggggaagccctgaaggttctcaaagctctt
gaagctgttgtaagccacctgaggaaatttttagttgatcaaactgttcttcctctcttt
gaaaagacacataattcagtaggcactcaagaccttcaagcagagtcaaggcctgaaaag
ttatctctgcttactgcttctcaaagtggaatcggaattgatcttcctattaggagagag
tctctgttccttgaacatgaaaaacagttcgagtcacgaatcccatcttctggaatttct
ttctttgggcaggatcctgcactttcgatggtgcattctagttcagggcttcatcggtct
gctgttcctatagttactcagattgctcaaaccatgcaaattcctttttcttatgctgag
gacatcattgggattggaggagttaatattgcatacattcggcgcactagtggagccgtc
ataactgtgcaagaaagtggtggcctatctgatgaaataaccgtcgaaattaaaggcacc
tcaatacaggttcagttggctcaacaactgattcaagaattcatgagcaatcacaaagat
ccgatcacaagcagcagtggctacagagacacggggtataggtcctcattttcgcagttg
ggcaacacatcttccctttcgtctcaacaaccgtatggcggatacggaggaccttctagt
gtaagtggctactctacttttaggctttaa
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