KEGG   Hibiscus syriacus (Rose-of-Sharon): 120172955
Entry
120172955         CDS       T09559                                 
Name
(RefSeq) cullin-4-like
  KO
K10609  cullin 4
Organism
hsyr  Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr03420  Nucleotide excision repair
hsyr04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:hsyr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    120172955
  09124 Replication and repair
   03420 Nucleotide excision repair
    120172955
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:hsyr04121]
    120172955
   03400 DNA repair and recombination proteins [BR:hsyr03400]
    120172955
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:hsyr04147]
    120172955
Ubiquitin system [BR:hsyr04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Cullin
     120172955
DNA repair and recombination proteins [BR:hsyr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      120172955
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      120172955
Exosome [BR:hsyr04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   120172955
SSDB
Motif
Pfam: Cullin Cullin_Nedd8
Other DBs
NCBI-GeneID: 120172955
NCBI-ProteinID: XP_039036200
LinkDB
Position
Unknown
AA seq 815 aa
MSLPPTKRSLSSNAAASTSSSHFQPPMKKAKSQAVACSLDPNKNGIHNHHHNNQGDNDVV
FDPSSIALDYDSKSDDARAPAAANLSRKKATPPQPAKKLVIKLVKAKPTLPTNFEEETWA
KLKSAVNAIFLKQPDPCDLEKLYQAVNDLCLHKMGGSLYQRIEKECEEHISVALKTLVGQ
SPDLVVFLSLVEKYWQDLCDQMLMIRGIALYLDRTYVKQNPNVRSLWDMGLQHFRKHLSL
APEVEHKTVTGLLRMIESERLGEAVDRTLLNHLLKMFTALGIYSESFEKPFLECTSEFYA
AEGMKYMQQSDVPDYLKHVEMRLREENERCLLYLDAITRKPLIATAERQLLERHIPSIID
KGFKILMDGHRIEDLQRMYSLFSRVNALESLRQALSSYIRRTGQTLVMDEEKDKDMVSSL
LEFKVLLDSVLEESFSKNEAFCNTIKDSFEHLINLRQNRPAELIAKFLDEKLRAGNKGTS
EEELEGTLDKVLVLFRFIQGKDVFEAFYKKDLAKRLLLGKSASIDAEKSMISKLKTECGS
QFTNKLEGMFKDIELSKEINESFKQSSQARKQLPSGIEMSVHVLATGYWPTYPPMAVRLP
HELNVYQDIFKEFYLSKYSGRRLMWQNSLGHCVLKVDFPKGKKELAVSLFQTVVLMLFND
AEKLSFQDIKDSTGIEDKELRRTLQSLACGKVRVLQKLPKGRDVEDDDSFIFNEVFTAPL
YRLKVNAIQMKETVEENTSTTERVFQDRQYQVDAAIVRIMKTRKVLSHTLLITELFQQLK
FPIKPADLKKRIESLIDREYLERDKNNPQIYNYLA
NT seq 2448 nt   +upstreamnt  +downstreamnt
atgtctctcccccccaccaaacgctctctcagctccaacgccgccgcttccacctcctct
tctcactttcagccaccaatgaagaaagccaagtcccaagctgtggcttgctctctcgac
ccgaacaagaacggcattcacaaccaccaccacaacaaccaaggcgacaacgacgtcgtt
ttcgacccttcgtctattgccctcgactatgattccaagtccgacgatgcccgtgctccc
gccgccgctaatttgtctcgcaaaaaggctaccccacctcaacccgccaaaaaactcgtc
atcaaactcgttaaagcaaaaccgacattgcctacaaattttgaggaggaaacatgggcg
aagctgaagtcagccgttaatgctatatttctgaagcaaccagatccttgtgacttggag
aagctttaccaggctgtcaatgatctttgcctgcacaagatgggaggaagtctgtatcaa
cgaattgaaaaagaatgtgaagaacatatatctgtggcattaaaaactttggttgggcaa
agccctgacctggtggttttcttatcgcttgttgaaaaatattggcaagatctctgtgat
caaatgttgatgattcgtggtatagccttgtacctggacagaacatatgttaaacaaaac
ccaaatgtacgttctttgtgggacatgggcctgcaacacttccgaaaacatctttctcta
gctccagaagttgagcacaaaactgtcaccggtcttttaagaatgattgagagtgagagg
ttaggtgaagcagttgacaggacactacttaaccatcttctgaagatgtttactgctttg
ggcatttactcggaaagttttgagaagccattcctggagtgcacatctgagttttatgca
gctgaaggaatgaaatacatgcagcaatcagatgttccagattacttgaagcatgtagag
atgaggttacgtgaagaaaatgaaagatgtttactctacctggatgctattacaagaaag
ccactaatagcaacagcagaaaggcagctccttgaacgtcatataccttccattattgat
aagggatttaagattctgatggatggacatcgtatagaggaccttcagaggatgtactca
ctgttttcaagggtcaatgctcttgaatcactcaggcaggccctaagctcatatattcgg
agaactgggcagacccttgtcatggatgaagagaaagacaaggacatggtgtcttctttg
ttagaattcaaggtcttacttgactctgtattggaagaaagcttttccaagaatgaggca
ttttgcaacaccattaaggattcatttgagcatctaattaaccttcgtcaaaaccgacct
gctgagctaattgcaaagtttctggatgaaaagcttcgtgctggtaataagggtacttct
gaagaggaattagagggtacactggataaagttttggttttatttaggttcatccagggc
aaggacgtctttgaagcattctataagaaggatcttgctaaaagactgctattaggaaag
agtgcttctattgatgcagagaaatccatgatttctaagctgaagacagaatgtggcagc
cagtttacaaacaaacttgaaggaatgttcaaggatattgaactatcaaaggagataaat
gaatcattcaagcaatcatcccaagccaggaaacaacttccatcaggaattgagatgagt
gtccatgtcttagcaactgggtactggccaacttatccgcctatggctgttaggcttcct
catgagttgaatgtctatcaggacatctttaaggagttctatttgagtaagtacagtggg
aggcgtctaatgtggcaaaattcattgggtcattgtgtgttaaaagtagatttccccaaa
ggcaaaaaggagctggcagtttccttatttcagactgtagttctgatgttgttcaacgat
gctgaaaagcttagctttcaagacattaaggattccactggcattgaggacaaggagttg
aggaggaccttgcagtcccttgcatgtgggaaagtaagagtcctgcaaaagttgccaaaa
gggagggatgttgaagatgacgattcattcattttcaatgaagtgtttactgctcctctc
tatcgtctaaaggtaaatgcaatccagatgaaagagacagtggaggagaatacaagcacc
actgaaagagtatttcaagaccgtcagtatcaggttgatgctgctattgtccggataatg
aagacaaggaaagtgctgagtcacactcttttgataaccgaactcttccaacagcttaag
tttcccattaaaccagctgatttgaagaaaagaatcgagtctctcatcgacagggagtac
ctggagcgcgacaagaacaacccacaaatatacaattacttggcatga

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