Hibiscus syriacus (Rose-of-Sharon): 120172984
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Entry
120172984 CDS
T09559
Name
(RefSeq) LOW QUALITY PROTEIN: cyclic nucleotide-gated ion channel 1-like
KO
K05391
cyclic nucleotide gated channel, plant
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
120172984
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
hsyr04040
]
120172984
Ion channels [BR:
hsyr04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
120172984
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
IQ
Motif
Other DBs
NCBI-GeneID:
120172984
NCBI-ProteinID:
XP_039036224
LinkDB
All DBs
Position
Unknown
AA seq
708 aa
AA seq
DB search
MNYPQEKLVRFEDWNSERSTEGHFSDNNRINLGKIRFKMNSFSEKFQRGVESSSERFKGI
RRSFKSXSFNRSFGSNKKVLDPQGPFLQRWNKIFLLSCILAVSIDPLFFYVPVINDDKKC
LVLDEKMEITASVLRSFTDIFYIIHIIFQFHTGFIAPSSRVFGRGVLVEDSLAIAKRYLQ
SYFIIDVLAVLPLPQVVILIVIPQMRGSKTLNTKNLLTFIVLFQYLPRVFRIYPLYKEIT
RTSGILTETAWAGAAFNLFLYMLASHVFGAFWYLFSIEREYTCWKDACRNNAECSPRSFY
CDGDSSFSVLLNESCPIQTPNTTLFNFGIFLDALQSGVVESEDFLEKFFYCFWWGLQNLS
SLGQNLKTSTYVFEICFAVFISISGLVLFSFLIGNMQTYLQSTTTRLEEMRVKRRDAEQW
MSHRLLPESLRERIRRYEQYRWQETRGVDEENLLCNLPKDLRRDIKRHLCLALLMRVPMF
EKMDEQLLDAMCDRLKPVLYTEESYIVREGDPVDEMLLIMRGKLLTMTTNGGRTGFFNSE
YLGAGDFCGEELLTWALDPHSSSNLPISTRTVRALTEVEAFALMADDLKFVASQFRRLHS
KQLRHTFRFYSQQWRTWAACFIQAAWRRYSKKKLEESLREEENRLQDALANAGGSSPSLG
ATIYASRFAANALRALRKNRSRKARVTERIPPILLQKPAEPDFTAEEQ
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atgaattatcctcaagagaagcttgtgaggtttgaggactggaactcagagagaagcact
gaaggacatttctctgataataacaggataaatttggggaagattaggttcaaaatgaat
tcattttcagaaaagtttcaaagaggggttgaatcaagttctgaaaggtttaaagggatt
agaagatcatttaaatctnattcattcaatcgcagttttggttctaataagaaagttctt
gatccacaggggccgttccttcaaaggtggaacaagatatttttactgtcatgtatccta
gcagtctcaattgatcctttgttcttttacgtacctgtgattaatgatgataaaaagtgt
cttgttttggatgaaaagatggagattacagccagtgtgctgcgttctttcacggatatc
ttttatataatccatataatttttcagtttcatactggcttcattgcaccctcttctcgt
gtatttggaagaggggttttagttgaagattcattggcaatagcaaagaggtatctgcaa
tcatacttcataatcgatgttctagcagttcttcccctgccacaggtggtgattttaatt
gtcataccacaaatgagaggttcaaagacattgaatacgaagaacttgttgacatttatt
gttctcttccaatatctgccaagagtttttcgaatatatccactgtataaggaaattaca
aggacttccggcatactaactgagactgcatgggctggagctgcattcaatctgtttctt
tacatgctagcaagccacgtttttggggcattttggtacttgttttccattgaaagagaa
tacacatgctggaaagatgcctgtaggaataatgctgaatgctccccccgttcattttac
tgtgatggtgattcttcttttagtgtgttgctgaatgaatcgtgtccaatacaaacaccc
aacacgactcttttcaattttgggatattccttgatgcccttcaatcaggtgttgtggag
tcagaagattttctagagaaatttttttactgtttttggtggggactgcaaaatctaagt
tctctgggtcagaatcttaagactagtacctatgtcttcgagatctgctttgcagttttc
atttcaatctcgggcttggttctgttttcatttctcattggaaatatgcagacatatttg
cagtccaccactaccaggttggaggagatgcgagtgaaaagacgtgatgcagagcaatgg
atgtcccaccgcttactacctgagagtctaagagagcggataagacgatacgaacaatac
aggtggcaagaaactagaggagttgatgaagagaatttactttgtaatctccccaaggac
ctaagaagggatataaagcgccatctttgtttggctctgctcatgagagtaccgatgttt
gagaaaatggatgaacaattattggatgcaatgtgtgatcgcctcaagccagttctctac
acggaggagagctacattgttcgggagggagacccagttgatgagatgctcttaatcatg
aggggcaaactattgaccatgacaacaaatggtggaagaactggcttctttaattctgaa
tatctgggggcaggggatttctgtggagaggaacttctcacatgggcactggatccccat
tcttcgtcgaacctccctatctcgactagaaccgttcgagctctgacagaagttgaagcc
ttcgctctgatggctgatgacttgaagtttgttgcttctcagttccgccggcttcacagt
aagcagctgcgccacacttttaggttctattcgcagcagtggaggacttgggcagcttgt
tttatacaagcagcttggcgccgatacagcaaaaagaaacttgaagaatctcttagagaa
gaagagaatagactgcaagatgctttagccaatgctggtgggagttcaccaagtctgggt
gccactatttatgcctctcggttcgctgccaatgcacttcgtgctttacggaaaaaccgt
agccgtaaagcaagagtgacggagaggattccacctatactgcttcagaagcctgcagag
cctgattttactgctgaggagcaatag
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