Hibiscus syriacus (Rose-of-Sharon): 120173096
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Entry
120173096 CDS
T09559
Name
(RefSeq) trafficking protein particle complex subunit 8-like
KO
K20305
trafficking protein particle complex subunit 8
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hsyr04131
]
120173096
Membrane trafficking [BR:
hsyr04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
120173096
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRAPPC-Trs85
Ig_TPPC8_C
TRAPPC9-Trs120
SNAP
TRAPPC13_C
Arrestin_C
Gryzun
Motif
Other DBs
NCBI-GeneID:
120173096
NCBI-ProteinID:
XP_039036310
LinkDB
All DBs
Position
Unknown
AA seq
1282 aa
AA seq
DB search
MADPANTPLGKMLLEEITPVVMVLSTQLVEQACLKNGISFVQMLSPFCDFTNIDVPVRTA
SDQPYRLRKFKLRFLYSSDVRQPNLEVAKERLKQVITHAGEKNFLESSEPSQFNDILSRP
ESEILPSWFQFFNKELVRTLSFSDHEAFDHPVACLLVVSSKDDGPINRFVDLFNTNKLPS
LINDGAMDPKILKHYLLVHDNQDGPLDKATKLLAEMRNAFGQNDCQIICINSSQNGNIQH
QDNPWALFKPDALPTENLGGFPNLDDLNEIKDFLQELSSKHIIPYMEQKIRVLNQQVSAT
RKGFRNQIKNLWWRKGKDETIDTPNGPVYTFNSIESQIRILGDYAFMLGDYEFALSNYRL
ISTDYKIDKAWKRYAGVQEMMGLTNFMLDQSRKDAEYCMENAFNTYLKLGSAGRRNATRC
GLWWVEMLKTRDQFKEAATVYFRICGEDTLHSAVMLEQASFCYLLSKPPMLHKYGFHLVL
SGDHYKKSDQIKHAIRTYRSAIPVYKGTTWSLIKDHVHFHIGQWYALLATYDVAVSHMLE
VLASTCQSKSTQELFLRDFLQIVQKSGRTFEVVKLQLPVINISSLKVIFEDRRTNASSEA
ASVRESVWRSLEEDIIPSLSTSRSNWLDLQSKHIPRKYKESNICVAGEAIKVDIEFKNPL
QIPISVSSVSLMCELSANPEEDANSSNIELPENESKTSTSTGDINSSLILSDVDFSLEGG
ETTLVQLTVTPRIEGILKIVGVKWKLSSSVVGLCNFESNPVNRRVVKGKRKAKHSPSNDL
KFLVIKSTPRLEGFIHSLPKKTYAGDLRPLVLELSNQSKFPVKNLKMKISNRRFLYAGNQ
RELNVDFPACLKKVNVEKSGGHTNGNKMSQNVFHFPEDVSVQEETSLSWPLWFHAAVPGN
IPLYITIYYETEGSSIMKYRTLRMHYNLQVLPSLDVSFELSARPSQSQEFLLRMDVVNKT
SSECFQVHQLSSVGQHWDISLLQPVDSILPSQSLFAGQSLSCFFMLKDRRSSTSEDSTPP
SLFQSDVRLGPRDSSEPPFDVSSSPLADFHDCERSCQGVSSQGYEYKVDFIFITQLPKGN
IDSGARNTPLVLSHHACDCSLSSMSPISWVVDGPRTIQHNFSAPLCAVNLKMTITNSSGS
VASVHINTFDSPSSNSQPKDDATASHPPENQTGWSDIPIASDTKIITNEALATRSSKSLS
LESVPQFIWSGSSSTKLTLQPRSTSEIPLQICAFAPGIYDLSNYVLNWDLTPVNDEVNQG
GGNKSSGSLQGHPYYLIVLEHT
NT seq
3849 nt
NT seq
+upstream
nt +downstream
nt
atggcggatccggccaacacgccacttggaaaaatgctattggaggagatcactcccgtg
gttatggtgctcagcactcaacttgttgaacaagcttgcctcaagaacggaatctccttc
gtccagatgctctcccctttctgcgacttcacaaacattgacgtgcctgtacggacggca
agtgatcaaccctacaggctgcggaagttcaaattgcgctttctttactcctcggatgtt
cgacaaccgaatctggaggtagcaaaagagaggctaaagcaggttattacccatgcagga
gagaaaaactttcttgaatcttcagaaccatctcaatttaacgatattctatctaggcct
gaatctgaaattttaccatcatggtttcagttttttaacaaagagcttgtacgtaccttg
tctttttcagaccatgaagcttttgaccatcctgtggcatgccttttggttgtgtcctcg
aaggatgatggacctataaacagatttgtagacctctttaacaccaacaaattgccctct
cttatcaatgatggtgcaatggacccaaagattttgaagcattacttacttgtgcatgat
aatcaagatggtcctttagataaggctactaaacttttggctgagatgagaaatgcattt
ggccaaaatgactgtcaaataatttgcattaattcttctcaaaatgggaatatccaacat
caagataacccatgggcgctatttaaacccgatgctttacctactgaaaatcttggtggt
ttccccaatcttgatgacctgaatgagataaaggattttcttcaagaattatcatctaaa
catatcattccttacatggaacaaaagatacgtgtgttgaaccaacaggtttctgctaca
aggaaaggttttaggaaccaaattaagaacttgtggtggaggaaagggaaagacgaaaca
atagatacccctaatggtcctgtgtatacctttaactcgattgaatctcagattagaatt
ttaggtgactatgcattcatgttaggagactatgaatttgcactatcaaattatcgccta
atttccactgattataagattgataaagcctggaagcgctatgctggtgtgcaggagatg
atgggacttaccaacttcatgcttgatcaatcaagaaaagatgcagagtattgcatggaa
aatgcatttaatacttatttaaaacttggatctgcgggtcgacgaaatgctaccagatgt
ggtctttggtgggtagagatgctgaagacaagagaccagtttaaagaagctgccactgtt
tatttccgcatttgtggtgaggatactttacattcggctgtgatgcttgagcaagcatct
ttttgttacttgttatcaaaaccaccaatgttgcataaatatgggtttcatcttgttctc
tccggcgatcattacaaaaaaagtgatcagattaagcatgcgattcgcacgtatagaagt
gctatacctgtttataagggaaccacttggagtcttattaaagatcatgttcatttccac
attggacagtggtatgctttacttgccacgtatgatgttgctgtctctcatatgctggaa
gttttggccagcacttgtcagtctaaatcaacacaggagctatttctgagagattttctt
cagattgtccagaaaagtgggaggacatttgaggtggtgaaacttcagttgcctgttatc
aacatttcctcccttaaggtcatttttgaagatcgtaggactaatgcctcttctgaagct
gctagtgtcagagaaagtgtatggcgttcactggaggaagacataatcccatcattgtct
acttccaggtccaactggctggacttacaatcaaagcatataccacgaaagtataaagaa
tcaaatatttgtgtggcaggagaagcaataaaagtggatattgaatttaaaaaccctctg
caaatccctatttctgtctcaagtgtttctctgatgtgtgagctctctgcaaatcctgaa
gaagatgctaatagttcaaacattgagctcccggaaaatgaaagcaaaacatcaacctcc
accggggatattaattcgtctttgattttatctgatgttgacttttcattagaagggggt
gaaacaaccttggtgcaacttactgttactccaagaatagaaggcattctgaaaatagtt
ggtgtgaaatggaaattgtctagttcagtggtaggtttatgtaattttgagtccaaccct
gtgaacagaagagttgtcaagggaaaaagaaaggctaagcattctcctagcaatgacttg
aagtttctagtgattaagagtacgcccagacttgagggttttattcattctttaccaaaa
aaaacttacgctggagacttgcggcctcttgtgttggaactaagtaaccaatcaaagttt
cctgtcaagaaccttaagatgaagatcagcaatcgcagattcctatatgctgggaatcaa
agggaattgaatgtagactttcctgcttgcttaaaaaaggtgaatgttgagaaaagcggt
gggcatactaatggtaataaaatgtcgcagaatgtctttcactttcctgaggatgtatca
gtgcaggaggaaacatcattatcatggcctctttggtttcatgctgctgttcccggaaat
attcctttgtacattacaatatattatgaaacggaaggatcaagcatcatgaaatatcgc
actctacgcatgcattataatttgcaggttttaccatcgttggatgtatcatttgaactt
agtgctcgcccatcacaatcgcaagagttcctcttgcgcatggatgttgtcaacaagacc
agttctgaatgcttccaggttcatcagttgtcatctgttgggcagcactgggatatctca
ttgcttcaacctgttgatagcatcttaccttctcaatctttatttgctggtcaatcactt
tcatgtttcttcatgcttaaggatcggaggtcatctacttctgaagatagtactccacct
tccctttttcaaagtgatgtaagattgggccctcgggatagtagtgaacccccctttgat
gtatcgagttcacctttggcagatttccatgattgtgaaagatcgtgccagggagtgtca
tctcaggggtatgaatataaagttgatttcattttcatcactcaactgccgaagggtaat
attgattccggtgctcgaaatacgccacttgtcttgtctcatcatgcttgtgattgcagt
ctttctagcatgagtccaatatcatgggtagtagatggacctcggaccattcaacataac
ttctcagcccctctatgtgcagtaaatttgaagatgactataaccaactcctccggttca
gtcgcatcagtccatatcaacaccttcgattcccccagtagtaacagccaacccaaagat
gatgccactgcatctcaccctccggaaaaccaaacggggtggtcggatattcccattgcc
agcgatacaaagatcatcacaaacgaagcccttgcaacacgatcttccaagtcactatcc
ctcgaaagtgtcccccagttcatttggtcagggtcgagctctactaaactcacacttcaa
cctaggtcgacctccgaaatccctcttcagatttgtgctttcgctcccgggatatacgac
ttgtcgaactacgttttgaattgggatcttacgcccgttaacgacgaggtaaaccaagga
ggagggaacaagtcgtccggatccctccaagggcatccgtattaccttatcgtgctcgaa
catacttga
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integrated database retrieval system
