Hibiscus syriacus (Rose-of-Sharon): 120173114
Help
Entry
120173114 CDS
T09559
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase HOS1-like
KO
K16278
E3 ubiquitin-protein ligase HOS1 [EC:
2.3.2.27
]
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hsyr04121
]
120173114
Enzymes [BR:
hsyr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120173114
Ubiquitin system [BR:
hsyr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
120173114
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ELYS
zf-C3HC4_3
Serine_rich
Prok-RING_4
VMAP-M1
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
120173114
NCBI-ProteinID:
XP_039036321
LinkDB
All DBs
Position
Unknown
AA seq
967 aa
AA seq
DB search
MEKSEINGPLFSSSPIRNGGTFRSPASPPLQPNFSSRAVQEALEHLATIDLSELVNEAKI
EHCRAARDLRSCGRYVQYALNSCGHASLCAECSQRYDVCPICRTPMVKSGNSRLRLRLFD
ECMDAGLISRRCDERFHEKEDRNNQLTSDVQRLYSFFDVALENNLVSLIYHYVTDICMDE
TAVSSDAVTALLLDEKVVKDWVKWTFKNMATELQRIYYLEVEEMKXRLGSLLKFSVHLAS
LSNVLEVLDSSFKGRLSAQLHDLRNLQESILKTKQHLEITIWCIRYQFLEDVRSRHADYT
SWRIHVRERKSAAIARXWPPPELLDLSADSTGQGASLFIEDALENLDIYEMGEESDFAFL
KKNGALSLFQSKIGGIAGCYPFESLRAAVDILFLGGASDLVLAKQAIFVYFLFDRHWRRP
EEEWRDIIDDFASSFGISRHSLLESFAFCLLDDHSHEALLECHQLLPEISGPETHPKIAQ
VLLERQNPKAAQMVIRGSGRDGGSQMVSLTEAVTIVRVKVECALLTEAFAYQRMICIKVR
EKKFKYELSGDAFDDFKGQCRSWMDWIEVLVTEFCCLCIRRNVVDQIIELPWNGEEEKYI
HKCLLDCATDNPTSTIGSLLVVFYLQRYRYVEAYEVNFKLWSLEEDFISAHSGDEKFLEA
LSSMESHRQXRKKLVDKGIELLPEVLQQQVKTGTLPDILVTSHQEDETPTRTGFRELQEP
KSASLLVPSTSESIVLQPDHMATPLRQPVSEIPKILGEYVNNAHVEAGTHVSTSILPGKL
FVDAERLSNVEGSKNFKFENIFSPGIHRASPIFATPLKGIGQSSSRELSSRHLREKQPDK
IISESEQNGFVKQVHNASPPYSRRLTANPASTPSSNFGLFKGLAHNLQPNISAKRGQSDR
DDGHRNVLPTEDLMDGSGERSLEDRNAQEGPRWRSDETSGDEGQSPDRTMQVGATPVRGR
RRRFLRR
NT seq
2904 nt
NT seq
+upstream
nt +downstream
nt
atggagaaatcggaaatcaacggtcctcttttctcttcgtcccccattcgtaatggcgga
acctttagatcaccagcttctcctcctcttcaacccaacttcagtagccgagccgttcag
gaagctttggaacacttggcaactatcgaccttagtgagttagtcaatgaggcgaaaatt
gagcactgtcgagcagctagagacttaagaagctgtgggcgttacgtacagtatgcatta
aactcgtgcggacatgcttctctatgcgcggagtgtagtcaacgctatgatgtttgtcca
atttgtagaacccctatggtaaaaagtggtaacagtagacttcgccttcgccttttcgat
gagtgcatggatgccggcctcatatctagaagatgtgatgagaggtttcacgagaaagaa
gatagaaataatcaactcacatctgatgtccagcgactttattctttctttgatgtagcc
ttggagaataacttggtttctttgatttatcattatgttacagatatatgtatggatgaa
actgctgtgtccagtgatgctgtcacagctttgttgctggatgagaaggttgtcaaggat
tgggtcaagtggacatttaaaaacatggcaacagaacttcaacgtatatattatcttgaa
gtagaagagatgaaanataggttaggttcacttctaaaattttctgtacatctggccagc
ttatccaatgtacttgaagttttggactcatctttcaagggtcgtctttcagcacagctt
catgacttgcgcaaccttcaagagagcatattgaagacaaagcagcatctggagatcaca
atatggtgtataagataccaattcttagaagatgtgaggtctcgtcatgctgattacaca
tcctggcgtattcatgtccgtgaaaggaaatcggctgcaattgcgcggncgtggcctccg
cctgagctgttagatctctcagcagactccactggacagggtgcttctctttttattgaa
gatgcactagaaaaccttgacatatatgagatgggggaagagtcagattttgcctttttg
aagaagaatggtgccttgtccttattccagtccaaaatagggggcattgcaggatgttat
ccatttgaaagtcttcgagctgctgtggacatcctctttctaggtggtgcttctgatttg
gtgcttgccaagcaagcaatttttgtgtatttcctgtttgatcggcattggagaaggcct
gaggaagaatggagggatatcattgatgactttgcaagctcctttggtataagcagacat
tcattactcgagtcattcgctttctgccttctggatgaccactcacatgaagctttactg
gaatgtcatcaacttcttcctgaaatctctggcccagaaactcatccaaagattgcacaa
gttctgttagaaaggcagaatcctaaggcagcacaaatggtgatacgcgggtctggccgt
gatggtggatcacagatggtttcacttaccgaggctgttactattgttcgggtgaaagtg
gagtgtgcactattgactgaagcatttgcatatcagcgaatgatctgtataaaagtccgg
gaaaagaagttcaaatatgaactgagcggggatgcatttgatgacttcaaaggtcaatgc
aggtcttggatggactggatagaagtactggtgactgagttctgttgtttatgcatcagg
aggaatgtggttgatcaaataatagaattaccgtggaatggtgaagaggagaaatatatt
cacaaatgcctgttagattgtgcaactgataaccccacatctactattggaagtctcctt
gttgtattctatcttcagcgctatcggtatgttgaggcatatgaagtcaattttaaactt
tggagcttagaggaagatttcatttcagcccattctggtgatgaaaaatttctagaagct
ttatcaagtatggaatcacatcgtcagnngaggaaaaaattggttgataaaggtatagaa
ttgcttccagaagtccttcaacaacaagtgaagactggaacattgcctgatatattagtt
acttctcatcaggaggacgaaacgccaacaagaactggtttccgtgaattgcaagaacca
aaatcagcgagtttgttggttccctccacttctgaatctattgttcttcaaccagaccat
atggctactcctttgagacaacccgtttctgaaattcctaaaatattgggtgaatatgtc
aacaatgctcatgttgaagccgggacccatgtatctacatcaattctccctgggaaatta
tttgtagatgcagaaagattatcaaacgttgaaggaagcaaaaacttcaaatttgagaac
atctttagtcctggaattcatcgtgcaagtcccatatttgctacaccattaaaaggtatc
ggtcagagttcatcaagagagctttcaagcagacacctacgagaaaaacaacctgataaa
atcatttcagagtctgagcaaaatgggtttgttaaacaagtccacaatgcaagtcctcct
tattcccggaggttgacagctaatcctgcctctacacctagcagtaactttggattgttt
aaaggtttggcacataacttacaaccaaatatttctgctaagaggggtcaatcagataga
gatgacggtcatcggaatgtgcttcctactgaagacttaatggatggctctggagagagg
tctttggaggacagaaatgcacaggaaggaccaagatggagatccgatgaaacgagcggt
gatgaagggcaaagtccggacagaaccatgcaagttggtgcaaccccggtgagggggcga
aggaggagattcttgagaagatga
DBGET
integrated database retrieval system
