KEGG   Hibiscus syriacus (Rose-of-Sharon): 120173690
Entry
120173690         CDS       T09559                                 
Name
(RefSeq) small nuclear ribonucleoprotein SmD1a-like
  KO
K11087  small nuclear ribonucleoprotein D1
Organism
hsyr  Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:hsyr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    120173690
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:hsyr03041]
    120173690
   03032 DNA replication proteins [BR:hsyr03032]
    120173690
Spliceosome [BR:hsyr03041]
 Complex A
  U1 snRNP components
   Sm proteins
    120173690
  U2 snRNP components
    120173690
 Complex B
  U1 snRNP components
    120173690
  U4/U6.U5 tri-snRNP components
    120173690
 Complex C
  U2 snRNP components
    120173690
DNA replication proteins [BR:hsyr03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     120173690
SSDB
Motif
Pfam: LSM EBNA2_Core Gemin7
Other DBs
NCBI-GeneID: 120173690
NCBI-ProteinID: XP_039036704
LinkDB
Position
Unknown
AA seq 114 aa
MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDVSMNTHLKTVKLTLKGKNPISLDHLSV
RGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGKPLGRGRGRGRGRGRGRGR
NT seq 345 nt   +upstreamnt  +downstreamnt
atgaagctcgtcaggtttttgatgaagttgaacaatgaaacggtgtcaattgagctcaag
aatggaaccgttgttcacggcaccattacaggtgtggatgtcagtatgaacacccatctg
aaaacagtgaaacttacactgaaggggaaaaatccaatcagtttagatcaccttagtgtg
aggggtaacaacattcgctactatattctacctgacagcttaaatcttgagacattgctg
gttgaagagacacctagggtgaaacccaagaaaccaacagctggaaagcctttgggacgc
gggcggggtcgtgggcgtggacggggacgtggtcgaggccgttaa

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