Hibiscus syriacus (Rose-of-Sharon): 120173775
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Entry
120173775 CDS
T09559
Name
(RefSeq) LOW QUALITY PROTEIN: DNA mismatch repair protein PMS1-like
KO
K10858
DNA mismatch repair protein PMS2
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr03430
Mismatch repair
hsyr03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
120173775
03460 Fanconi anemia pathway
120173775
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hsyr03400
]
120173775
DNA repair and recombination proteins [BR:
hsyr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
120173775
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_mis_repair
MutL_C
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
120173775
NCBI-ProteinID:
XP_039036781
LinkDB
All DBs
Position
Unknown
AA seq
965 aa
AA seq
DB search
MEGPAPSNSPVIKPINKGVVHRICAGQVILDLSSAVKELVENSLDAGATTVEIALKEYGE
EWFKVIDNGCGISPTNFKVVALRHHTSKLADFPDLESLTTFGFRGEALSSLCSLGILTIE
TRTKNEPVATHLTFDHSGVLIAEKKIARQIGTTVTVKKLFSNLPVRNKEFHRNIRKEYGK
LISLLTAYALTAKGVRLVCSNTSGKNSKSVVLKTQGSCSLKDNIIQVLGVNTFSGLKPVS
IGISDSCNIEGFISKSGQGCGRNLGDRQYFFVNGRPVDMPKVSKLVNEFYKGANSKQYPI
AVMNFIIPTRECDVNVTPDKRKVFFSDESLILRSLREGLQEIYSSSNASYIINGVESTKE
AESSEFCSSLEKYNSLLKKLPPAGVNLKLSTKEHSAEGDPSFTTVKINSQSLEFSEGFVS
SDHENMSTLGVQGTNKIDGVIEANAGQLTSHMDGTLNKDFSEGPILRHHQGSLKKDFILQ
VHRTNKVNGSEPNNGGLTTHMNSISNKDSASSSTAIGKEIFISRDRKSHSSCVQSSLKEF
VTISKRKHESISTVLSERPVLRNQNLHYQSKNSNSDMCALSSRDQVDDSYKLKENEPRKF
IRANNILGEIGNPSSPSGGKPGELIPLHELQNHENMVPYAGKELIDLFHKNPEDVPEKAL
TVPTLESLSSALVVDAPIPPSDKKICSILEFRFQDLLAKRQQRMSRVLHTSYRFLSMKKK
RSMKRFNPSSEIVIQFLLVIXFSLLTRIYTCMKYYRISQVIGQFNLGFIIGKLDEDLFIV
DQHAADEKYNFEHLAQSTILNQQPLLRPLKLELSPAEEVVASMHMDIIRKNGFVLEEDPD
APPGHHFKLRAVPFSKNITFGVEDVKDLISTLSDSQGECSIIGSYKMDTSDSVCPTRVHG
MLASRACRSSVMIGDPLGRNEMQKILEHLADLKSPWNCPHGRPTMRHLIDLTTLRKEPDE
SDTSS
NT seq
2898 nt
NT seq
+upstream
nt +downstream
nt
atggaaggaccggctccgtccaattccccggtaattaagcctataaacaaaggcgttgtc
cacagaatctgcgccggtcaagtcatattagacctctcctcagccgttaaggaactcgtt
gagaacagcctcgacgctggcgccaccaccgtcgaaatcgctctaaaagagtacggagaa
gaatggtttaaggtcatcgacaatggctgcggcatttcccctactaatttcaaggtggtg
gcacttagacatcatacgtcgaagctagcggatttcccagaccttgagtctctgactacg
tttggatttagaggggaagcgttgagttcgctttgctctttggggattctgacaattgaa
acgagaacgaaaaatgaaccagttgcaacgcatttaacttttgatcattcgggtgtgtta
atagctgagaagaaaattgcacggcaaattggtactacagtcactgtaaagaagttgttc
tcgaacctaccagtgcgaaacaaggaatttcatcgcaacatacgcaaggagtatggcaaa
cttatttccttgttgactgcatatgcactcacagcaaaaggggtcaggttagtctgcagc
aacacaagcggaaaaaattcgaagtctgtggttcttaaaacacagggaagttgttccctc
aaagataacatcatacaagttttaggtgtgaacacatttagcggcttaaagcctgtatct
ataggtatatcagacagctgcaacattgaaggttttatttctaagtctggacagggttgt
ggccgcaatctgggagatagacaatacttctttgtaaatggtagaccagtggatatgcct
aaggtgagcaagcttgtgaatgaattttataaaggtgcaaactctaagcagtatcccata
gccgtaatgaattttatcattccaactagagaatgtgatgtgaatgtcactcctgataaa
agaaaagtgttcttttctgatgaaagcttgattttgcgatctttgagagagggtttgcag
gagatatattcctcgagtaatgccagttacataattaatggtgttgagagcactaaggaa
gctgaatcctctgagttttgctcttcactagaaaaatataatagccttttaaaaaagtta
cctccagctggagttaatttgaaactttccacgaaggaacattctgcggagggggacccc
tcttttacaactgttaaaatcaactctcaaagtttggagttttcagaaggatttgtttct
agtgatcatgagaacatgtcgactttaggagtacagggaacaaacaagattgatggtgtt
atagaggctaatgcagggcaattgacaagtcatatggatggtacacttaacaaggatttt
tcagaaggaccaatccttagacaccatcagggttcattgaagaaggacttcatcttacaa
gttcacagaactaataaggtcaatggttcagagcctaataatgggggtttgacaactcat
atgaacagtatatctaacaaggattctgcatcttcctcaactgcaattgggaaagaaatt
tttataagtagagatcgtaagagtcattcaagctgtgttcaatcatcgctgaaagaattt
gtaaccataagtaagaggaaacatgaaagcattagtactgtattatcggaaaggcctgtc
ttaagaaatcaaaatcttcattatcaatcgaagaacagcaattcagatatgtgtgctttg
agctcaagagatcaagttgatgattcctataagttgaaggagaatgagcctagaaagttt
attagagcaaataacatcttgggtgaaattggaaaccctagttctcctagtggtggaaaa
cctggagagctaattcctttacatgaattacagaatcacgaaaacatggtgccttatgcg
ggaaaagaactaattgatttattccacaagaatcctgaggatgtacctgaaaaggcattg
acagttccaacattagagtctttatcctctgctttagttgtagatgctcccatacctcca
tctgataaaaagatatgttccatcttggagtttagatttcaagacctattggcaaagagg
caacagaggatgtcaagagtattgcacactagttatagattcctcagcatgaagaagaaa
aggtccatgaaaagattcaatccaagtagcgaaattgttatccagttcttgttagtaata
tgattttctttattgacaagaatttatacatgcatgaaatactatcgtatttcacaggtt
attgggcaatttaatcttggattcattatcgggaagttagacgaagatttatttattgtg
gatcagcatgctgctgatgagaaatacaattttgagcatctggctcaatcaaccatcttg
aaccagcagcctttgcttcggccactgaaattggagctgtctcctgcagaagaagtagtt
gcttcaatgcatatggacataatcaggaaaaatgggtttgttttggaagaggatccagat
gctccaccggggcaccattttaagctcagagctgttccctttagtaaaaacattactttt
ggagttgaagatgtcaaagacttgatctctacgctttcggacagtcaaggagaatgctca
ataatcggcagttataaaatggacacatctgattctgtttgcccaactagagtccatggg
atgttagcgtcacgtgcttgcagatcatccgtcatgattggagatccacttggacgaaat
gaaatgcaaaagatacttgagcatttggcagacttgaagtcgccgtggaattgcccgcat
ggccgaccgacgatgcggcatttgatagacctgacaaccttaaggaaagaaccagatgaa
agtgacacaagctcttga
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