Hibiscus syriacus (Rose-of-Sharon): 120173869
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Entry
120173869 CDS
T09559
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein PRP4-like protein isoform X1
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120173869
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hsyr03041
]
120173869
Spliceosome [BR:
hsyr03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
120173869
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40_Prp19
WD40
Beta-prop_THOC3
Beta-prop_WDR3_1st
Beta-prop_WDR3_2nd
WD40_Gbeta
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
EIF3I
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WDR55
WD40_MABP1-WDR62_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
Beta-prop_EML
Beta-prop_WDR36-Utp21_1st
Beta-prop_TEP1_C
PRP4
Beta-prop_EIPR1
Beta-prop_IFT122_1st
Beta-prop_Aladin
ANAPC4_WD40
NBCH_WD40
WDR90_beta-prop_4th
Beta-prop_WDR41
Beta-prop_DCAF4
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
WD40_RFWD3
WD_LRWD1
Beta-prop_SCAP
Beta-prop_SPT8
Beta-prop_NWD2_C
WD40_like
Tricorn_2nd
Motif
Other DBs
NCBI-GeneID:
120173869
NCBI-ProteinID:
XP_039036849
LinkDB
All DBs
Position
Unknown
AA seq
577 aa
AA seq
DB search
MDVDDDNSPSTSIAVPDGKTTASTADNTPSQPVQPMAPPVVTPTVVPPIAPIPAAVPSIA
PIPAVPPPLVVNPLASLPGRPPVLKPPVSQNGEVKTGDSDSDHEDDGRATGGEYEISEES
RLVRERQEKAMQDLLMKRRAAALAVPTNDMAVRTRLRRLGEPITLFGEREMERRERLRMI
MAKLDAEGQLDKLMKAHEEEEAAISARAEDIEEDIEYPFYTYGPKELLDARIDIAKYSIV
KAAARLQRARRKRDDPDEDIDAEIDWALRQAGNLVLDCSEIGDDRPLSGCSFSRDGKLLA
TCSLSGVAKLWSMPRLSKVSALKGHTERATDVTFSPVCDHLATASADRTAKLWSPDGSLL
KTFEGHLDRLARIAFHPSGKYLGTTSFDKTWRLWDIDSGVELLLQEGHSRSVYGIAFHQD
GSLVASCGLDALTRVWDLRTGKSILALEGHVKPVLGASFSPNGYQLATGGEDNTCRIWDL
RKKKSMYVIPAHSNLISQVKFEPQEGYYLVTSSYDMTAKVWSGRDFKPVKSLPGHEAKVT
ASDITEDGRYIVTVSHDRTIKLWTAGDIEKENDMDLD
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atggatgttgatgatgacaacagtccatcaacttcaatcgcagttcctgatggcaaaacc
acggcgtctacagctgataatacgccaagccagcctgttcagcctatggctccgccagtg
gtcacacctacagttgtaccacctattgctccaatacctgcagctgtgccatctattgca
ccaatacctgcagttcctccgcccctggttgtcaacccattggcatctctcccaggtcgc
ccccctgtccttaagccacctgtgtctcaaaatggtgaggtgaaaactggtgattcagac
tctgaccatgaggatgatgggcgagctactggtggggaatatgagatctcagaagagagc
agactggttagagagcggcaagaaaaggcaatgcaagatcttctgatgaaacgacgtgct
gctgcactagcagtgcccactaatgacatggctgtccgtactcgacttcgccggcttggt
gaacctataactctttttggagaaagagagatggaaaggagggaaaggctgcgaatgatt
atggcgaaactggatgctgaggggcaattggacaagttaatgaaagctcatgaggaggaa
gaggctgcaatttctgctagggcagaggacattgaagaagacattgaatatcccttttat
acttatggtccaaaagagcttttggatgcaaggattgatattgcaaagtactctattgta
aaggcagctgcacgtcttcaacgtgcccggagaaaaagggatgatccagatgaagatatc
gatgctgaaattgattgggctctaaggcaggcggggaatttggttcttgattgcagtgaa
attggagatgatagaccactttcgggttgttctttctctcgtgatggaaaacttctagcc
acctgttctttgagtggagttgctaagttgtggtcaatgcctaggctaagcaaggtttct
gccttaaagggtcacacagaacgtgcaacagatgttacattttctcctgtgtgtgatcat
ttagcaactgcttctgctgaccgaacagcaaagttatggagccctgatggatctctcttg
aagacatttgagggccatttggatcgccttgctcgtattgccttccatccttcagggaag
taccttggtacgactagctttgataaaacgtggagactgtgggacatagatagtggtgtg
gagttgcttctccaagaaggtcacagtaggagtgtctatggaattgccttccatcaagat
ggatctttagtagcatcatgtggacttgatgcacttactcgtgtttgggatcttcgcact
gggaaaagtattcttgccttggaaggccatgtgaagccggttcttggtgctagtttttca
cccaatggctatcaattagccacaggcggtgaagataatacttgccgcatatgggatttg
aggaagaaaaagtctatgtacgtcataccggcccattcaaatcttatatcacaagtgaag
tttgagcctcaagagggatattacttggtcacatcctcttatgatatgactgcaaaggtt
tggtctggaagagattttaagcccgttaaaagcttaccaggtcatgaagcgaaagtcacc
gcttcagatattactgaagatgggcgatatattgtgacagtctctcatgatcgaaccata
aagctatggactgctggtgacattgaaaaggaaaatgatatggatttggactga
DBGET
integrated database retrieval system
