Hibiscus syriacus (Rose-of-Sharon): 120174088
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Entry
120174088 CDS
T09559
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 13-like isoform X1
KO
K15164
mediator of RNA polymerase II transcription subunit 13
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hsyr03021
]
120174088
Transcription machinery [BR:
hsyr03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
120174088
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MID_MedPIWI
Med13_C
Motif
Other DBs
NCBI-GeneID:
120174088
NCBI-ProteinID:
XP_039036991
LinkDB
All DBs
Position
Unknown
AA seq
1727 aa
AA seq
DB search
MCGRLTGCCPNDLVKQVYLSNSGKNSPPYHTSQSSVCQLRDQNCYVKVSFGCSKYRSDKS
LNPNPDHIRNLHKHQSTDAYTMGRREHKGSADPLSVHEKTFIYPPETVLVPVLQISFARS
SLRRFWLQNWIGPSLAGSSFFRHCDGNINFLEKSWVDFSGILSQHCYNSSSNSNNSSISS
ISSSSSESVTTGARDIEADADSSCRQSGLSSNDQMVTDHLKLGSKRPRIGMTGSYGQAGV
GNDQIGSNWDWDDDDRGIVMDIQSLLSEFGDFGDFFENDVLPFGEPPGTAESSAIMFGTS
DCGDIGSSPVGAMDTSDQMLLPAGLPSFDNFNPPLPVSTEEFLSKSQEITNSAVTSGPSN
QTPASSTGEFDHLMKAEALMTFAVEYGAVKTPASDSSSIFRNPYLPKSHKTENSNSSQNN
YKYAATSPSFPCFSGLDEKTGMSMNLKAHPGGLNSNAMLQLKKYYTHVETRAERFGRRLL
THNDSNATNEMSGTSQFCNFYSINSDNSAGRKMSQGIFGGERILQSMRTVLGTDVECAMF
QASMLRMRHILLPPTSPATINLSRPTTSSVLNQLPDEPSTMTDNLSSRYEVNKKECIPFK
SAGDIDGIMLDGHLNAPVGVWRPIGATKISKLATPSTEANPSLTHNLFNEESMPSYGQSQ
PLQELLDGIPLLVQQATSFVDLPLDAGDGYCPYSWLALQEHWRRGFCCGPSMVHAGCGGT
LASCHSLDIAGVELVDPLSANIHASSVISLLHSDIKSALKSAFGSLDGPLSVTDWCRGRS
QSGDVGASADGSSTESNISECRDSSSTVTLSVGEAISPSQTSVGGSSFHKVIGAIDGGKV
DETNQRRLNQETSGSELEQQQCSWLRPTVFVLPSPAILVGYQDDWLKTSGNSLQLWEKAP
LEPYALAKPINYTVICPDIDPLTSAAADFFQQLGIVYETCKLGTHSPQSLGNQMEIDSGK
WFSSGFVLLDCPQSMKIESSNASLLGSISDFFLSLSNGWDLTCYLKSLSKALKALKIGQF
LFANQKEGISSPCMVIYVVCPFPEPTAVLKTVIESSIAVGSNILPSDRDRRSQLHSQVGK
ALSSSAAADETSISNIPVVSGFSVPKVVLQIVTVDAIFRVTSPPFNELVILKEMAFTVYN
KARRISRGSMNDLALSSSLSSRSHSVLTHVTSIPAMWKDSVGSRIPGSSIPREGEIDSSL
RGGTWENSWQTRTGGLSCDPNRNGDFIYPDEVRYMFEPLFILAESGSLEHGVSPTSFGNS
TSETSKIVTDESSGGFMQTANSVGSTDPGSASQLAGLESDGLDSSNQKTPSLHCCYGWTE
DWRWLVCIWTDARGELLDCNIFPFGGISGRQDTKGLLCLFVQVLQQGCQILQACASSDTG
VVKPRDFVITRIGSFYELEYLEWQKAIYSVGGSEVKKWPLQLRRSVPDGMPASTNGTSLD
QQEMSLIQDRTLPSSPSPLYSSHTKASFMKGNLGQPAAGKQLLSRQTLVDNSRGLLQWVQ
SISFVSVSVDHSLHLVLQADSVSPAGTHGGSGPGQSGYIEGFTPVRSLGSTSASYMLIPS
PSMRFLPPTPLQLPICLTAESPPLAHLLHSKGSAIPLSTGFVVSKAVPSLRKDCKNYPKE
EWPSVLSVSLIDYYGGNKVAQDKVIRGITKQAGRTPSSETRDFEVDNHLILASIAAELHA
LSWMTVSPGFLDRRTALPFHTDMVLRLGRLLHFAEKELCRKPDKSQV
NT seq
5184 nt
NT seq
+upstream
nt +downstream
nt
atgtgtggaaggctcacaggatgttgtccgaacgatcttgtcaagcaagtctatctcagc
aactctggaaaaaatagtccaccatatcatacttctcaaagttctgtttgccagttgagg
gaccaaaactgctatgtcaaagttagttttggatgctcaaaatatagaagtgataagtca
ctgaacccaaatcctgatcatatcaggaatttacacaagcaccagtctactgacgcttat
acaatgggaagaagagagcataagggatcagcagatcccttgtcagtacatgagaaaaca
tttatctatccacctgagactgtgcttgtccctgttttgcaaatatcctttgctagatcc
tctttgagaagattctggttacaaaactggataggaccttcattggctggttcatccttt
tttaggcattgtgatggcaatataaatttcctggaaaaatcctgggttgatttcagtgga
atactctcacagcattgctataacagcagcagcaatagtaataatagtagcataagttct
ataagtagtagttccagtgaaagtgtgaccacaggtgctcgtgacatagaggcagatgca
gattcatcatgtagacagtcaggcttatcttctaatgatcagatggtgactgatcacctc
aaactgggttccaagcgtcctcgaattgggatgacagggtcatatggtcaagcaggtgtt
ggaaatgatcaaattggttctaattgggattgggatgacgacgacagaggaattgtcatg
gatatccaatctcttctctctgaatttggagactttggcgacttcttcgaaaatgatgtc
ctgccatttggggagcccccaggaactgcagagtcatcggctattatgtttggtacttca
gattgtggagacataggaagcagtccggttggggcaatggatacttcagatcagatgctt
ttgcctgcaggtcttccttcctttgataactttaatccacctcttccggtttccacagag
gaatttttgagcaaaagtcaagagatcacaaacagtgctgtgacatctggtccatcaaac
caaactccagcttcttccactggtgagtttgatcatttaatgaaagctgaagcgctaatg
acttttgcagttgaatatggtgcagtaaaaacgcctgcaagtgattcctcatcaattttc
agaaacccttatctcccaaagtctcataaaacggagaattctaattcgagccaaaataat
tacaaatatgctgcaacatcaccctcttttccgtgctttagtggattggatgagaagact
ggcatgtctatgaatttgaaggctcaccctggagggctcaattccaatgccatgctccaa
ctgaagaaatattatactcatgtggaaacaagggcagagagatttggtaggaggttgctc
acgcataatgatagcaatgctacaaatgagatgtcgggaacatctcagttttgtaatttt
tattcaatcaattcagataattctgctggcaggaaaatgtcacaaggcatatttggcgga
gagcgtatccttcaatctatgagaactgtgctaggaactgatgtggaatgtgctatgttc
caagcttcgatgttaaggatgcgacacatactattgcctcccactagtcctgcaactatt
aacttgagtaggcctactactagttctgttttaaaccagcttcctgatgaacctagtacc
atgacagacaatctatctagccggtatgaggtgaacaagaaagaatgtatacctttcaaa
agtgctggtgatattgatggaataatgctagatgggcatcttaatgctcctgtaggagta
tggcgtcctattggagctacaaaaatttcaaagcttgctactccaagtactgaagctaat
ccatcattaacccataatttatttaatgaggaaagtatgccatcttacgggcaaagtcaa
ccacttcaggaacttcttgatggcattccattattggtccagcaagctacttcctttgtt
gatttgccgttggatgctggtgatggctactgtccttacagctggcttgcattacaagag
cattggaggcgaggattttgttgtgggccttctatggttcatgcaggttgtggagggact
ttggcttcttgtcattccctggacattgctggtgtggagttagtagatccactttctgct
aatattcatgcttcttccgtaatcagtttgcttcattctgacataaagtcagccttaaaa
tctgcatttggtagtttggatggtcctttgtctgtcactgactggtgcagaggtcgcagt
caatcaggtgatgttggagcctctgctgatggatcatcaacagagtccaatataagtgaa
tgccgagactcttcaagtaccgtaactctctctgtgggggaagcaataagtccatcgcaa
acttctgttggtggatcatctttccataaagttattggtgcaatagatggaggtaaagtt
gatgagaccaaccaaaggagattgaaccaagaaacctctggttctgagttagagcaacaa
caatgcagttggctaagaccaacagtttttgttctcccatcacctgcaatacttgttggg
taccaggatgattggcttaaaacttcaggaaactcattgcagctgtgggaaaaggctcct
cttgaaccatatgctctagcaaaacctataaattatactgttatatgccccgatattgat
ccccttacttctgctgctgcagattttttccaacaactcggaattgtatatgagacatgc
aaactgggaactcactcccctcagagtttgggaaatcagatggagattgattcgggaaaa
tggttttcttctggttttgtcctacttgattgcccccaatcaatgaagatagaaagtagt
aatgcatctctcctgggatcgataagtgatttttttctctctctgtcaaatggttgggac
ttgacctgctatctcaaatctctttctaaggcccttaaagctttgaaaattggtcaattt
ttgttcgcaaaccaaaaggaaggaataagcagcccttgtatggtaatatatgtggtttgc
cccttcccagagcctacggcagtcctaaaaactgtcattgaatcttctattgctgttgga
tcaaatattctgccttcagatagggataggaggtcacagctgcacagtcaggtggggaag
gcattaagcagctcagcagctgcggatgaaacatcaatatcaaatattcctgtagtttct
gggtttagtgttccaaaagtggttcttcagatcgtaacagtggatgccatttttagggtt
acaagtccaccttttaatgaacttgtcattcttaaggagatggctttcactgtatacaac
aaagctcggcgaatttcacgaggatccatgaatgatctagccttgtcatcatcattatct
agtaggtctcattctgtcttaactcatgtgacatctattccagcaatgtggaaggattct
gtcggttctcgaatcccagggtcttctattcctagagagggtgaaattgattccagcttg
aggggtggtacttgggaaaattcatggcaaacaaggacaggaggattaagttgtgaccca
aatagaaatggggatttcatctatcccgatgaggtccgttacatgtttgagccccttttt
attcttgcagagtctggttctttagagcatggagtttcacctacatcttttggtaattca
acctctgaaacttcaaagatagtcacagatgaaagtagtggtggcttcatgcagactgca
aattcagtaggaagtactgatccggggtcagcctctcagcttgctggattggagtctgat
ggtcttgattctagtaaccaaaagacccctagcttacactgttgctatggatggacagaa
gattggcggtggctggtgtgcatctggacagatgcaaggggggaattgcttgactgcaac
atattcccttttggtggaattagtggtagacaggacacaaaaggtctactgtgccttttt
gtacaagttctgcagcaaggctgtcaaatacttcaggcatgtgcttcatctgatactggt
gttgtcaagcccagagactttgtgatcacacgcattggaagtttctatgagcttgaatat
cttgagtggcaaaaagccatctattcagttggtggatctgaggtgaagaagtggcctctt
cagttgcgcagatctgttcctgatggcatgcctgctagcacaaacggaacttcattggat
cagcaagagatgagtttgattcaggatagaacattgccttcctcgcctagtccactgtac
agttcgcacacaaaggctagctttatgaaaggtaatttaggacaaccagctgcaggaaag
cagcttttgagtagacaaacattagttgacaactctaggggattgcttcagtgggtgcag
agtatcagttttgtttcagtttcagttgaccattctttacatctagtgttgcaagcagat
tcagtgtctcctgcaggaactcatggtggcagtggtccgggtcagtcaggctacatagaa
gggttcactcccgtaagatctcttggttcaacatctgcttcttacatgttaatcccatcg
cccagtatgaggttcctacctccaacacctcttcaactgccaatatgtctaactgcggag
tcaccaccgcttgctcatcttcttcacagcaagggctctgcgatccctctttcaactggt
tttgtggtgtcaaaggctgtaccgtctctgaggaaagactgcaaaaattacccaaaagag
gaatggccttcggttctttctgtgagtctcattgattattatggaggtaataaggttgcc
caagataaagtaatcagaggaattacaaagcaggcaggaaggactccaagctctgaaact
agagattttgaagttgataaccatttgattttggcatctattgcagcagagcttcatgct
ctgtcatggatgacagttagccctggatttttagatcgccgaactgcactgccgtttcac
actgatatggttttgagactcggaagattgcttcattttgcagagaaagagctctgtcgg
aaacccgataagtcccaagtttag
DBGET
integrated database retrieval system
