Hibiscus syriacus (Rose-of-Sharon): 120175114
Help
Entry
120175114 CDS
T09559
Name
(RefSeq) chaperonin CPN60-2, mitochondrial-like
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
120175114
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsyr03019
]
120175114
03110 Chaperones and folding catalysts [BR:
hsyr03110
]
120175114
03029 Mitochondrial biogenesis [BR:
hsyr03029
]
120175114
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hsyr04147
]
120175114
Enzymes [BR:
hsyr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
120175114
Messenger RNA biogenesis [BR:
hsyr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
120175114
Chaperones and folding catalysts [BR:
hsyr03110
]
Heat shock proteins
HSP60 / Chaperonin
120175114
Mitochondrial biogenesis [BR:
hsyr03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
120175114
Exosome [BR:
hsyr04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
120175114
Exosomal proteins of other body fluids (saliva and urine)
120175114
Exosomal proteins of breast cancer cells
120175114
Exosomal proteins of colorectal cancer cells
120175114
Exosomal proteins of bladder cancer cells
120175114
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cpn60_TCP1
DUF5570
MGAT2
Motif
Other DBs
NCBI-GeneID:
120175114
NCBI-ProteinID:
XP_039037748
LinkDB
All DBs
Position
Unknown
AA seq
573 aa
AA seq
DB search
MYRFASSLASKARIARNTSHQIGSRLSWNRNYAAKDIRFGIKARASMLKGVEELADAVRV
TMGLKGRNVVIEQSYGAPKVTKDGLTVAKSIEFKDKVKNVGASLVKQVANATNDVAGTTC
ETVLTRAIFTEGCKSVAAGMNAMDLRRGITVAVDTVVTNLKSRARMISTSEEIAQVGTIS
ANGEREIGELIAKAMEKVGKEGVITIQDGKTLFNELEVVEGMKLDRGYISPYFITNTKNQ
KCELDDPLILIHEKRISSLNAVVKVLELALKRQRSLLIVAEDVESEALATLILNKLRAGI
KVCAIKAPGFGENRKASLHDLAVLTGGEVITEELGMNLEKVDLDMLGTCKKVTVSKDDTV
ILDGNGDKKSIEERCEQIRSAIELSTSDYDKDKLQERLAKLSGGVAVLKIGGASEAEVGE
KKDRVTDALNATKAAVEEGIVPGGGVALLYASKELDKLPTANFDQKIGVQIIQNALKTPV
HTIASNAGVEGAVIVGKLLEQDNPDLGYDAAKGEYVDMVKAGFIDPLKVIRTALVDAASV
SSLMTTTEAVVVELPKDEKEVPAMPSGMGGMDY
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atgtatcgttttgcttcaagcctggcttccaaagctaggattgctaggaacacttcacat
cagattggtagtagattgagttggaataggaactatgcagcaaaagatattagatttggg
attaaagctcgagcttcgatgcttaaaggtgtcgaagagcttgctgatgctgttagagta
accatgggtcttaaggggcgtaatgtggttattgaacaaagctatggtgcccccaaagtg
actaaagatggtttaactgttgcaaagagcattgaattcaaagacaaagtcaagaacgtt
ggtgccagtcttgtgaaacaagttgcgaatgccaccaacgatgtagctgggaccacctgt
gagacagtgcttacacgagcaatatttacagaaggatgcaagtcggtggctgcaggaatg
aatgcgatggacctgaggcgtggcataacagtggcagttgacactgttgtgacaaacttg
aaaagtcgggcacggatgattagcacatctgaagagatagctcaggttggaacaatatca
gctaatggagagagggaaattggcgagttaattgcaaaggccatggagaaggttggcaaa
gaaggggtgataacaattcaggatggaaaaactctgtttaacgaattggaagttgtcgag
ggcatgaagctggacaggggctacatatctccatatttcatcaccaatacgaaaaaccaa
aaatgtgaattagatgatcctcttatcctaattcacgagaagagaatatcgagcttgaat
gctgttgtaaaagtactagagttagctttaaagaggcaaaggtcgttgctgatcgtagct
gaagatgtagagagtgaagcacttgctacactcattcttaacaagcttcgtgctggaatc
aaggtctgtgccatcaaagcccccggttttggagaaaacaggaaggctagtttgcatgat
cttgctgtcctcacaggaggagaggttataaccgaagaacttggcatgaaccttgaaaag
gtggatctggacatgcttggaacttgcaaaaaggtgacggtctcgaaggatgacaccgtt
attcttgacgggaatggtgacaagaaatctattgaagaaagatgtgaacagattaggtca
gcaattgaattgagcacctctgactatgataaagataagctgcaagagagactggcaaag
ctttctggtggtgtggctgtcttgaagattggaggagctagcgaagctgaagttggcgag
aagaaggatagagttacagatgcattaaatgctacaaaggcagctgtagaagagggtatt
gtgccaggtggtggtgtcgctcttttgtatgcatcgaaagagttggacaagctacctaca
gccaactttgaccagaagataggtgttcaaattatccagaatgctctaaagacacctgtg
cacacaattgcttcaaatgccggagtcgagggagccgttattgtcggtaagctgttggag
caggataaccctgatctcgggtatgatgcagccaaaggtgaatatgtcgatatggtgaag
gcgggtttcattgatccattgaaagtaataagaactgctttggtcgatgctgcaagtgtg
tcctcattgatgacaacaaccgaagccgttgtagtcgaacttcccaaggacgagaaggaa
gttccggcaatgcccagcggtatgggaggcatggattattga
DBGET
integrated database retrieval system
