KEGG   Hibiscus syriacus (Rose-of-Sharon): 120175382
Entry
120175382         CDS       T09559                                 
Name
(RefSeq) exosome complex component RRP41 homolog isoform X1
  KO
K11600  exosome complex component RRP41
Organism
hsyr  Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:hsyr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    120175382
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hsyr03019]
    120175382
Messenger RNA biogenesis [BR:hsyr03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     120175382
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Cofactors
     120175382
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-GeneID: 120175382
NCBI-ProteinID: XP_039037941
LinkDB
Position
Unknown
AA seq 244 aa
MSKTEYVSPEGLRLDGRRPMEMRQLRAEIGTVAKANGSAVFEMGNTKVIAAVYGPREVQN
RSQQLNDHALVRCEYSMANFSTGDRMRKPKGDRRSTEISLVIRQTMEACILTHLMPRSQI
DIFVQVLQADGGTRSACINAATLALADAGIPMRDIVTSCSAGYLNSTPLLDLNYIEDSAG
GPDVTVGILPKLDKVTLLQMDAKLPVDIFENVMGLAVEGCKAVANYIREVLLENTKQLEY
RRGL
NT seq 735 nt   +upstreamnt  +downstreamnt
atgtcgaagacagaatacgtgagccccgaaggtctccgattggacggtcgccgtcccatg
gaaatgagacaacttcgtgcagagatcggtaccgtcgccaaagctaatggctctgctgtt
tttgagatgggcaacaccaaagtcattgcagcagtgtatggccctcgagaggtgcaaaat
aggagccaacaacttaatgaccatgcactggtgcgctgtgaatacagtatggctaatttt
agtaccggagatcgaatgaggaaaccgaagggtgacaggcgttcgacagagatatctctt
gtcatccgccagaccatggaggcatgcattttgactcatctaatgcctcgttctcagata
gatatatttgttcaagttcttcaagccgatggaggaactagatcggcatgtatcaatgct
gcaactttagccctcgctgatgctgggatcccaatgcgtgatatcgtcacttcttgcagt
gctgggtatctaaatagcactcctctgctagatttgaactacattgaagacagtgctgga
ggccccgatgtcaccgtggggatcttgcctaagttggacaaagtgactctacttcagatg
gatgctaagttaccggtggatatcttcgaaaacgtcatgggacttgcggtcgaaggctgc
aaggctgtagctaactacattagagaagtattactagagaataccaagcaactggagtat
cgacgaggtctataa

DBGET integrated database retrieval system