Hibiscus syriacus (Rose-of-Sharon): 120175626
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Entry
120175626 CDS
T09559
Name
(RefSeq) probable E3 ubiquitin ligase SUD1 isoform X1
KO
K10661
E3 ubiquitin-protein ligase MARCH6 [EC:
2.3.2.27
]
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
120175626
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hsyr04121
]
120175626
Enzymes [BR:
hsyr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120175626
Ubiquitin system [BR:
hsyr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
March proteins
120175626
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MARCHF6_C
RINGv
zf-RING_2
zf-ANAPC11
DUF8011
Motif
Other DBs
NCBI-GeneID:
120175626
NCBI-ProteinID:
XP_039038168
LinkDB
All DBs
Position
Unknown
AA seq
1102 aa
AA seq
DB search
MEIAPASPPPPPPPPPPGIENPGSSTDAIVEDTMKPSPSILSTSSEKEEKGKPSVSFGAG
AAKYGAEMKEEEEEEEDVCRICRNPGDAENPLRYPCACSGSIKFVHQDCLLQWLNHSNAR
QCEVCKHAFSFSPVYSDNAPARLPFQEFVVGMAMKACHVLQFFLRLSFVLSVWLLIIPFI
TFWIWRLAFVQSFGEAQSLFVSHISTTIILTDCLHGFLLSASIVFIFLGATSLRDYYRHL
RELGGDAEREDEGDRNGAHAARRPPGQANRNLAGDDNGEDAGGAQGIGGAGQLIRRNAEN
VAAHWEMQAARLEAHVEQMFDGLDDADGAEDVPFDELVGMQGPVFHLVENAFTVLASNMI
FLGVVIFLPFSIGRIILYYLSWLFSSASGPVLSVVMPLTDTALSLANITLKNTLTAVTKS
TGVTEVSSNTSASFSEDLLKGVNLGSSRLSDVTTLAIGYMFFFSLVFFYLGIITLIRYTR
GEPLTMGRFYGIASLAETIPSLFRQFLAAMRHLMTMIKVAFLLVIELGVFPLMCGWWLDV
CTIRMFGKSMSQRVQFFSVSPLASSLIHWVVGIVYMLQISIFVSLLRGVLRNGVLYFLRD
PADPNYNPFRDLIDDPVHKHARRVLLSVAVYGSLIVMLVFLPVKLAMRMAPSIFPLDISV
SDPFTEIPADMLLFQICIPFAVEHFKLRTTIKSLLHYWFTAVGWALGLTDFLLPRPEENG
GQENVNVEPGQQDRLQIMQLGGQEQAMVAFAAADDPNRGLLASGNSNAVEFDGDEQTDSD
RYSFVPRIILLLVIAWMTLLVFNSALIVVPVSLGRALFNAIPLLPITHGIKCNDLYAFVI
GSYFIWTALAGARYYIEHIRTKRASVLLGQIWKWGVIFIKSTLLLSIWIFVIPVLIGLLF
ELLVIVPMRVPVDESPVFLLYQDWALGLIFLKIWTRLVMLDHMMPLVDESWRIKFERVRE
DGFSRLQGLWVLREIVFPIIMKLLTALCLPYVLARGVFPVLGRPLVVNSAVYRFAWLGCL
CFSFLCFCAKRFHVWFTNLHNSIRDDRYLIGRRLCNFGEDSEQKQSEAGTSSETLASNPQ
DTGIIRRPDRDADVGLRPRRIN
NT seq
3309 nt
NT seq
+upstream
nt +downstream
nt
atggagatcgctcctgcgtctccgccgccgccgccgccgccgccaccgccgggcattgaa
aaccccggttcatctacagatgccattgtagaagacaccatgaagccgtctccatcaata
ttgtccacatcgtccgagaaggaagaaaaagggaagccatcggtgtcgttcggggcgggg
gcggcgaagtatggtgcggagatgaaggaggaggaggaagaagaggaagacgtttgcagg
atctgccggaacccgggcgatgcagagaatccgcttcgatacccttgcgcgtgtagcggc
agtatcaaatttgttcaccaggattgccttcttcaatggctgaatcacagtaatgctcgc
caatgcgaggtttgcaagcatgcattttctttctctcctgtgtactctgataatgctcca
gcaaggcttccttttcaggagtttgtggttgggatggcaatgaaagcttgtcatgttctg
cagttctttttgcgccttagttttgtactttcagtttggctcctcattatacctttcatt
accttttggatatggcggttggcttttgtccagagtttcggtgaagctcagagtttattc
gtaagccatatttcaaccacaatcattcttactgattgcttgcatgggttcctactttca
gctagcattgtgtttatttttcttggagccacttctttgagggattattaccggcattta
cgagagcttggaggagatgctgaaagagaagatgaaggggataggaatggtgctcatgct
gctaggcgacccccgggacaagctaataggaatttagctggtgatgataatggtgaagat
gctggtggagcacaaggtattggtggagctggccaattgatcagaaggaatgctgaaaat
gtagctgctcattgggaaatgcaggcagctcgtcttgaagctcatgttgaacagatgttt
gatggcctggatgatgcagatggcgccgaagatgtaccttttgatgagcttgttggcatg
cagggtcctgttttccatttggttgagaatgcattcactgttctagcgagcaatatgata
ttccttggtgttgtaatttttctgcctttctctataggccgcattattctctattattta
tcctggcttttctcttctgcaagtggcccggtgctgtcagtagtcatgccactgacagat
accgctctttccttggcaaacatcacattaaagaacacattaactgctgttacaaaatct
actggagtcactgaagtctcaagcaacacaagtgcatcattttcagaagatcttttgaaa
ggagtcaatcttggatcgtcaaggctttctgatgttacaactcttgctattggttacatg
ttttttttctccttagtcttcttctaccttggtattatcactttgattaggtacactagg
ggtgagcctttgacaatggggaggttctatggaattgcctcactagccgaaacaatacca
tccctcttcaggcagttcttggcagcaatgaggcacttgatgacaatgattaaagttgct
ttcttgcttgtaattgagcttggggtgttccctttgatgtgtggatggtggctagatgta
tgtacaataaggatgtttgggaaatcgatgtctcaaagagttcagttcttctcagtttca
cctttagcaagctcattgatacattgggttgtaggaattgtgtacatgctacaaataagt
atctttgtcagccttcttcgaggggttttacgtaatggggttctatacttccttcgagac
ccagctgatccaaactacaatcccttccgtgatttaattgatgatcctgtacacaagcac
gctaggagggtcttgttatcagttgcagtttatgggagtttgattgtgatgctggtattt
ttgccagtcaagcttgctatgaggatggctccctctattttcccactcgatatatcggta
tcagacccatttactgagattccagctgacatgcttctctttcaaatatgcattccattt
gccgtcgagcattttaaattgcggacaacaatcaagtctcttctgcactattggtttact
gcagttggttgggcattaggcttaactgacttcttacttcccagaccggaggagaatggt
ggccaggaaaatgtcaatgtggaaccaggacaacaggatagactacagatcatgcaacta
ggtggacaggaacaggccatggttgcatttgctgctgctgatgatcccaatagaggtctc
ctggcatcagggaactctaatgctgtggaatttgatggggatgagcaaaccgattcagac
aggtacagttttgttcctcgcattatcttgttgctggttattgcttggatgactttgctt
gtattcaactctgccctgatagtagtaccggtatcacttggacgtgctctattcaatgca
attcctcttctcccgataactcacggcattaagtgcaatgacctttatgctttcgtcatt
ggaagctatttcatttggacagccttggctggggctaggtactacattgagcacataaga
acaaagagggcttcagttctgttaggtcaaatctggaagtggggtgtcattttcatcaag
agcaccttgctcttatcaatatggatttttgtcattcctgttcttattggcctacttttt
gagcttttggtgattgtgcctatgcgggtgcctgtggacgagagtccagttttcctcctc
taccaagattgggcgttgggtctcatttttctgaagatatggacaagactggttatgctg
gaccatatgatgccattggtagatgaaagctggcgaataaaattcgaaagggtgagagaa
gatggcttctccagactgcagggcctttgggtattgcgggagattgtgttccccattata
atgaagttgctgacagcattgtgcttaccttacgtattagcccgaggggtatttcctgtg
ctcggccgcccattagtggtaaactcggcggtctaccgatttgcatggctaggatgcctt
tgcttcagcttcttgtgtttctgtgccaagaggttccatgtctggttcactaacctccac
aactccataagggatgacagatacctcatcggtcgtcgactttgtaactttggggaagac
tcagaacagaagcaaagtgaggcaggaacctcatctgaaacactggcttctaatccacag
gacactggaataatccggcggcccgaccgtgacgctgatgtcgggttgagaccgaggcgt
attaattaa
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