Hibiscus syriacus (Rose-of-Sharon): 120177885
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Entry
120177885 CDS
T09559
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1 homolog KTN80.4-like isoform X1
KO
K18643
katanin p80 WD40 repeat-containing subunit B1
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
hsyr04812
]
120177885
Cytoskeleton proteins [BR:
hsyr04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
120177885
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Katanin_con80
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
EIF3I
WDR55
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
ANAPC4_WD40
Beta-prop_SCAP
WD40_MABP1-WDR62_1st
Beta-prop_DCAF4
Beta-prop_TEP1_C
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
NBCH_WD40
Beta-prop_IFT122_1st
Beta-prop_EIPR1
Beta-prop_SPT8
Beta-prop_IFT140_1st
eIF2A
Beta-prop_IP5PC_F
Beta-prop_HPS5
Beta-prop_Vps41
Beta-prop_WDR19_1st
Beta-prop_RIG_1st
Beta-prop_VPS8
PROPPIN
Motif
Other DBs
NCBI-GeneID:
120177885
NCBI-ProteinID:
XP_039039799
LinkDB
All DBs
Position
Unknown
AA seq
855 aa
AA seq
DB search
MTTKRAYKLQEFVAHSSAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTS
GVDSVTFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGS
LDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNIVKVWDLTAGKLLHD
FKYHEGQIQCLDFHPHEFLLATGSADRTVKFWDLESFELIGSAGPETTGVRCLTFNPDGR
TILCGLHENLKVFSWEPIRCHDGVDVGWSRLSDLNIHEGKLLGCSYNQSCVGVWVVDISR
IEPYAIGTGNRVSGHAEPKTSSGGNLSVLNENTTKPSMGKLYVSQNPDTLVKETKSLGRL
SISQNSDPAKESKSMASPRNVPGFPQRANINTVPKTTQPNSVTVHTVAAPKRNSTKASSC
ISAPSFSKSDVIPVIVPRNDLRLEQAAESRKEAGTTGRCLEQAAESRKEVGISGRSLEQV
AESRKEIGIAERSSEPSQPAAESRKEAGIIGRTLEQGADSRKELGIVGRTMPFSLQSKTS
SFRKFQNFKEEMDRPDISAPSETTGSKAAEFNSVLDRSSFVVVKGPIQGMSAAERNMRED
RCIGSGKSEPNSVTELPSSYRNENRRTCSVVLNLEKRGRSSNFDLPTMSISPRNVSMENV
PSFNAYKQRGYSASVQKEMPSASDEDAVADLLEHHDQFISSMQSRFAKLQAVHRFWERND
IKGAISAIEKMADYAVLADVMSIVIEKMDIVTLDICTCLLPLLSGLLASDMDRHLSICLD
MLLKLVRVFGSMIYSTISASTPVGVDIEAEQRFERCNLCFVELEKVKRSLPSLTRRGGSV
SKSAQELNLALQEVS
NT seq
2568 nt
NT seq
+upstream
nt +downstream
nt
atgaccaccaaacgcgcttacaaactacaggaatttgtggcacattcttctgctgtgaat
tgcctgaagattggaaggaaatcgtcgagggttcttgtaactggaggggaagatcacaag
gttaatctttgggctattggcaaacccaatgccatactgagtttatcgggacatacaagt
ggagtagattctgtaacctttgattcttcagaagtattggtggctgcaggtgctgcaagt
ggtaccatcaaactttgggatttggaggaggcaaaaattgttcggactctgactggtcat
agatccaattgcatctctgtggatttccacccatttggtgagttctttgcatctggctct
ctcgatacaaatctcaaaatatgggatatcagaaagaaagggtgtatccacacttacaag
ggccacactcgaggagtcaatgcaatcaggtttacaccagatggccgatgggttgtgtcc
ggtggcgaggacaacattgtgaaggtgtgggatttaactgctggaaaattgttgcatgat
ttcaagtatcatgaaggtcaaattcagtgcttagattttcatccccatgagtttctattg
gctacaggttcagctgatcggactgttaaattttgggaccttgaaagctttgaacttatt
ggttcagctggacccgagactactggagttcgttgcttgaccttcaatcctgatgggagg
actattctctgtggattacatgaaaatctgaaggttttctcttgggaacctataagatgt
catgatggtgtggatgtgggatggtctagattgtcagatcttaatattcatgaaggaaag
cttcttggctgctcatataatcaaagctgtgttggagtatgggttgtagatatctcgcgc
atagaaccatatgctattggtactggtaatcgtgtgagtggtcatgctgaacccaaaact
agttcaggtggaaacctctctgttctgaatgaaaacacgacaaaacctagcatgggaaaa
ttatatgtttcacaaaatccggatactttagtgaaggaaacaaaatcccttggaaggttg
tccatttcacaaaattcggatcctgccaaggagtccaaaagtatggcatccccaagaaat
gtacctggtttcccccagagggccaatataaatacagttccaaagacaactcaaccaaat
tctgtaacagttcatactgtagcagctccaaaaaggaattctacaaaggctagttcatgc
atcagtgctccaagttttagcaagtcggatgtcatacctgtgattgtgcctagaaatgat
ctgaggttggagcaggctgctgaatcaaggaaggaagctggaacaactgggagatgtttg
gagcaggccgctgaatcaagaaaagaagttggaatatctgggagaagtttggaacaggtt
gctgagtcaagaaaagaaattggaatagctgagagaagttcggagccaagccagccagct
gctgaatcaagaaaagaagctgggataattggaagaactttggagcagggagctgattcc
agaaaagaacttggtattgttggaagaaccatgccattttctttgcagtcaaagacaagt
agtttccgaaagtttcaaaatttcaaggaagaaatggacaggccagatatctctgctcca
tctgaaactacaggttctaaggctgctgaattcaacagtgtcctggacaggagtagtttt
gttgttgttaaaggccctattcaaggaatgtctgctgccgaaaggaatatgagggaagat
aggtgcattggctctggcaagagtgaaccaaattcagtgacagagttgccttctagctac
cggaatgaaaatcgaagaacgtgttctgtagtcttaaatttggagaaaagagggagatct
tctaattttgatttaccaactatgagtatctctccgaggaatgtatcaatggaaaacgtg
ccctccttcaatgcgtataaacaaagaggatactctgcatctgtgcaaaaagaaatgcct
tctgccagtgatgaggatgctgttgcagatttgctggagcaccatgaccaattcattagt
tccatgcaatctcgttttgccaagttacaggctgttcataggttttgggaaagaaatgac
atcaagggggcaatatctgcaattgaaaagatggctgattatgctgtgcttgctgatgtc
atgagcattgtcattgagaaaatggacatcgtcacattggacatttgcacttgtcttctg
ccccttctgtctggtctccttgcaagtgacatggataggcatttgagcatctgtctagac
atgctgcttaagctggtaagggtatttggctccatgatatattcaaccatatcagcttca
acacccgttggcgtggacatcgaggcagagcaaaggtttgagcgttgcaacctctgcttt
gtagaactagagaaagtaaaacgcagtctgccctctcttaccagaagaggggggtcggtt
tcgaaatccgcccaggaattgaacctcgcactacaggaagtatcgtga
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