Hibiscus syriacus (Rose-of-Sharon): 120178082
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Entry
120178082 CDS
T09559
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp31 homolog
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120178082
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hsyr03041
]
120178082
Spliceosome [BR:
hsyr03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
120178082
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Nop
Prp31_C
Motif
Other DBs
NCBI-GeneID:
120178082
NCBI-ProteinID:
XP_039039961
LinkDB
All DBs
Position
Unknown
AA seq
485 aa
AA seq
DB search
MATLADSFLADLDELSDNEADVLEEENDDVTHMEEDIDGDLADIENLNYDDLDSVSKLQK
SQRYIDIMQKVENALEKGSDISNQGMVLEDDPEYQLIVDCNGLSVDIENEIIIIHNFIRD
KYRLKFPELESLVHHPIDYARVVKKIGNEMDLTLVDLEGLLPSAIIMVVSVTASTTSGKP
LPEDVLQKTIDACDRALALDAAKKKVLDFVESRLGYIAPNLSTIVGSAVAAKLMGTAGGL
SALAKMPACNVQLLGAKKKTLAGFSTATSQFRVGYIEQTEIFQTTPPGLRSRACRLLASK
ATLAARIDSTRGDPSGNAGKTLKEEIHKKIEKWQEPPPAKQAKPLPVPDSEPKKKRGGRR
LRKMKERYAITDMRKLANRMQFGVPEESSLGDGLGEGYGMLGQAGSGKLRVSVGQSKLAA
KVAKKFKEKSYGSSGATSGLTSSLAFTPVQGIELTNPQAHAHQLGSGTQSTYFSETGTFS
KIKRT
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atggcaactttagctgattcattccttgcggaccttgatgagttatcagataacgaagcc
gatgttctcgaggaagaaaatgatgatgtcacacacatggaagaagatattgatggtgac
ctggcagatatcgaaaaccttaactacgatgatctggacagtgtttccaaattacaaaaa
agtcagagatacattgatataatgcagaaagtggagaatgccctcgagaagggttctgat
atctcaaatcagggaatggtactggaagatgatcctgagtatcagctgattgtggactgt
aatggactctctgttgatattgagaatgagattattattatccataattttattcgtgac
aagtaccgattgaagtttcctgagcttgaatctcttgtacatcatccaattgattacgca
cgtgtggtgaaaaagataggaaatgagatggatttaaccctggttgatttggaaggtctt
ttgccttctgctatcattatggttgtttcagttacagcatcgactaccagtggcaagcca
cttccagaagacgttcttcagaaaactattgatgcgtgtgatcgtgctcttgctcttgat
gcagcaaagaaaaaggttcttgattttgtagaaagcagattgggatatattgcaccaaat
ctttctactattgttgggagtgctgttgctgctaaacttatgggtactgctggtggtctt
tcagcattggctaagatgcctgcttgtaatgttcagctgcttggtgcaaagaaaaagact
cttgcagggttttccactgcaacgtctcagtttcgtgttggttatattgaacagactgag
atttttcaaactacaccccctggtttgaggagtcgtgcttgccgtctcttggcttcaaaa
gcaacacttgcagcacgtatagattctactagaggggatccgtcaggtaatgctggaaaa
actttaaaggaagagattcataagaaaattgaaaaatggcaagagccacctcctgcaaag
caggctaaaccacttcctgttcctgattctgaacctaagaaaaagaggggtggccgtcgc
ttgaggaagatgaaagagaggtatgctataacagacatgaggaagctggcaaacaggatg
caatttggtgtacctgaggaaagctccttaggtgacggactaggtgaaggctatggaatg
ctcggtcaggctgggagtggcaaactgcgtgtttcagttggtcagagtaaacttgcagcg
aaagttgctaagaagttcaaggaaaagagttatggaagcagtggtgctacctctgggctg
acttcgagtttggcattcacacctgtgcaggggattgagcttacaaatcctcaagctcat
gcacatcagcttggcagcggaactcaaagcacttacttctcggagacgggaactttttca
aagatcaagagaacataa
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