Hibiscus syriacus (Rose-of-Sharon): 120178914
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Entry
120178914 CDS
T09559
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 23-like
KO
K15166
mediator of RNA polymerase II transcription subunit 23
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hsyr03021
]
120178914
Transcription machinery [BR:
hsyr03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Other mediators
120178914
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Med23
Motif
Other DBs
NCBI-GeneID:
120178914
NCBI-ProteinID:
XP_039040611
LinkDB
All DBs
Position
Unknown
AA seq
1604 aa
AA seq
DB search
MDQKQRSVAAAANSRAYQFHPARAAISDLFNLYLGRSSRQKADDSVREPPNKTHKRVLAL
NRELPPRNEQFLIDFEQLQTQFGDQDQLQSVTESVLISLVIQCCSHAPRAEFLLFALRSL
CSIGYINWDTLLPSLLSSVASAEVPVSQGSQGVPSVSSTSLSQSGMMPSTSVTANTSNFQ
SSNPASTLNPVHVIGSPAQSTIESSSVATLSPVKLSDIACNGQPSTTRIDPSIRHNAISN
LRQLCCKIILTGLECNLKPVTQAEIFYHMLNWLVNWDQRQQGNEECDGKSWRLNKALIEW
LHSCLDVIWLLVEEDKCRVPFYELLRSGLQFIENIPDDEALFTLILEIHRRRDMMAMHMQ
MLDQHLHCPTFGTHRILPQTIPNIAVEGVANLRYSPITYPSVLGEPLHGEDLAASIQRGS
LDWERALRCIRHAIRSTPSPDWWKRVLVVAPFYRGSVPTPGAVFTCDMICEATIDRIVEL
LKLTNAEINCWQEWLVFSDIFFFFMKSGCIDFVDFIDKLGSRLTASDHHILNTNHVTWLL
AQIIRVEHVMTALNTDSRKVETTRKILSFHREDRSSDPNNPQSILLDFISSCQNLRIWSL
NTSTREYLNNEQLQKGKQIDEWWKQVSKGEHMMDYMNMDDKSIGMFWVVSYTMAQPACET
VMNWLSSGGVTELLPGANVQPNERFMVMREVSPLPISLLSGFSMNLYLKLVLQMEESLFA
GQVVPSIAMVETYTRLLLIAPHSLFRSHFSHLAQRNASLLSKPAVTLLVLEIVNYRLLPL
YRYQGKCKPLMYDVTKIISALKGKRRDHRVFRLAENLCINLILSLRDFFSVKREGKGPTE
FTETLNRITIITLAITIKTRGIAEADHQLYLQTMLEQVLATSQHTWSEKTLRYFPSLLRD
ILMSRTDKRGMAIQDWQQSETTVINQCTQLLSSSAEPNYVMTYLNHSFLQHRKYLCAGAW
ILMQGHPENLNSGNLARVFREVSPEEVTANIYTMVDVLLHHIHKELQHGHSLQDLLLKTC
ANLAFFVWTHELIPLDILLLALIDRDDDPHALRIVISLLERQELQQRVKLYCMNRGPPEH
WLYTGIFKRNDLQKALGNHLSWKERYPTFFDDIVARLLPVIPLIVYRLIENDAIESADRI
LAMYSVFLAYHPLRFTFVRDILAYFYGHLPGKLIVRILNVLDLSKIPFSESFPQHIGSSN
PAICPPLEYFATLLLALVNNVIPPLNSNSKSGSMGDASNNSVRGPHNKTPATPQSGPANA
SEGQKAFYQIQDPGTYTQLVLETAVIEILSLPISASQIVSSLVQIVVNIQPTLIQSSNGL
HGASNSGVQGSVLPTSPSGGSTDSAGRSTPSVSGINTSSFVSRSGYTCQQLSCLFIQACG
LLLAQLPPEFHLQLYMEASRIIKESWWLTDGKRSLNELDSAVCYALLDPTWASQDNTSTA
IGNIVALLHSFFNNLPQEWLEGTHVIIQHLRPVTSVAMLRIAFRIMGPLLPRLVNAHNLF
NKILSLLLNTLVDVFGKNIQPPVPVEASEISDLIDYLHHIIHYEGQGGPVQASSKPRPEV
LAICGRAAESLRSDVQHLLSHLKPDINSSIYAATHPKLVQNPST
NT seq
4815 nt
NT seq
+upstream
nt +downstream
nt
atggatcagaagcagagatcagtggcagcagctgcaaattcccgtgcctatcaattccac
cccgcgcgagctgccatttccgatctcttcaatctttacttaggaagaagtagccgccaa
aaagctgacgattctgttcgagaaccaccgaacaaaacccataagcgtgtgctcgctctt
aatagggagcttcctccgcgaaatgagcagttcctcatagattttgagcaacttcagact
cagtttggtgaccaagatcagttgcagtctgtgacagaatctgttctaatatctttggtt
attcagtgttgtagtcatgcaccacgggctgaatttcttctttttgctttacgtagcttg
tgcagtataggatacattaattgggatacccttttgccatcccttctctcttcagttgcc
tctgcagaagtgccagtgagtcaagggagtcagggagtgccttcagtttcatcaacaagt
ttatcacagtctggaatgatgccatctactagtgtaactgctaacacttctaattttcag
tcttcgaatcctgcatctacgttaaatccagttcatgttattgggtctccagcacaatct
acaattgaatcatcttcggttgccactttatcccctgtaaaattatctgatatagcctgc
aatggtcaaccatctacaactaggatagatccatctataagacataacgctataagcaat
ttacgtcagttatgctgcaagatcattttaactgggctagagtgtaatttgaaaccagtg
actcaagctgaaattttctaccatatgctgaattggctggttaattgggatcaaaggcaa
caggggaatgaggaatgtgatgggaagtcctggagactgaacaaggctctaattgaatgg
ctgcacagttgtttggatgtaatttggttgctggttgaggaagataaatgcagagtgcct
ttctatgaattacttagaagtggattgcagtttatagaaaacattcctgatgatgaagcc
ttgtttacacttatcttggaaatacataggaggagagatatgatggctatgcatatgcaa
atgttagaccagcatcttcactgcccaacatttggaactcatcggatattgccacagaca
attcctaacattgctgttgaaggtgtggcaaacttacggtattcaccaattacctatcca
agtgtgcttggagaaccgcttcatggagaggatcttgcagcttctatacagagaggtagt
ttggactgggagagagccttacgttgtataaggcatgctatacgctctactccttctcct
gattggtggaaacgtgttcttgtcgtggcacctttttatcgaggttcagtgccaactcct
ggtgctgtttttacctgcgatatgatctgcgaggcaacaattgatagaattgttgagctt
ttgaagttgacaaatgcagagataaattgctggcaggagtggcttgtcttctcagatata
ttcttctttttcatgaaaagtggatgcatagattttgttgattttattgataagttgggc
tcacgccttacagcaagtgatcaccacatacttaatacaaatcatgttacctggcttctt
gcacaaattattcgagttgaacatgtcatgactgctttgaatactgattccagaaaggtg
gagacaacaaggaagattctatcatttcacagagaagataggagctctgatcctaataat
ccccaaagcatcctgcttgatttcattagcagttgtcaaaacttacggatttggtcattg
aatacatcaactagagaatatttgaataatgaacagttgcagaaagggaagcaaatagat
gagtggtggaaacaagtgagcaaaggggaacacatgatggattatatgaatatggatgat
aaatcaattgggatgttttgggttgtctcctacaccatggcacagcctgcttgtgaaacg
gtcatgaattggttatcttctggtggagttacagagttgttacctggagcaaatgtacag
cccaatgagagattcatggtgatgcgggaagttagtccgttgccaatatcactgttatct
ggcttttcaatgaatctttatttgaagttggtcttgcaaatggaagaatctttatttgct
gggcaggttgttcctagtatagcaatggttgaaacatacaccagattgttgctcattgca
cctcattcattattccgttcacacttcagtcatttggcacagaggaatgcttctttattg
agcaagcctgcggtgacacttttggttcttgaaattgtgaactatcgcctgcttccactc
tacaggtaccaaggaaaatgcaagcctctgatgtatgatgttacaaaaataatttctgca
ttaaaaggaaaacggagagatcatcgtgtatttagattagctgagaacttgtgcataaat
ctgattttgtcattgagagactttttctcggtgaaaagggaagggaaggggcccactgaa
ttcacagaaactttaaatcggataaccattatcactcttgccatcactattaagacccgt
ggaattgcagaagctgatcaccaactttaccttcaaactatgttggaacaagtattggca
actagccaacatacgtggtcagagaaaacactacgatattttccctcacttcttcgtgat
attttaatgtcgcggacagacaaaagaggaatggcaattcaagattggcaacagtcagaa
acaacagtgattaaccagtgcacacaacttctttcatcatctgctgagccaaattatgtt
atgacttatctcaatcacagtttccttcaacaccgtaaatatctatgtgccggtgcatgg
attctgatgcaagggcaccctgaaaaccttaacagtgggaacttggcacgggtcttcaga
gaagtttcacctgaagaggtgacagccaatatttatacgatggtggacgtattacttcat
catattcataaggagcttcaacatgggcattccttgcaggaccttttattgaaaacttgt
gcaaacctggccttttttgtttggacccatgagcttattcctttggatatattacttctg
gcactcattgaccgggatgatgatcctcatgccctgcgtattgtgataagcttacttgaa
aggcaagagcttcaacaaagggtgaaattgtactgtatgaatcgtggtccccctgagcat
tggctttacactggaatatttaagcggaatgacttgcaaaaggcccttggtaatcatctc
tcatggaaggagaggtatcctacattctttgatgatattgtggcacgtttgctccctgtc
atccccttaattgtttacagacttattgagaatgatgccatagaatcagctgacaggatt
ttggcaatgtactctgtatttttagcttaccaccctttgagatttacatttgttcgtgat
attcttgcatatttctatggtcatctacctggaaagttaattgttcgaatattgaatgta
ctggatctcagcaagattcctttttccgagtcattccctcagcacattggttcatcaaat
cctgcaatatgccctcctctagaatattttgctactcttttattggctcttgtgaataat
gtgatacccccattaaacagtaactcaaaaagtgggtcaatgggagatgcttctaataat
tcagtgcgtggtcctcataacaaaactcctgcaacacctcagtctgggccagcaaatgct
tccgagggtcaaaaggcattctatcaaattcaggatccagggacatatactcaactggtt
ctggaaacagctgttatagagatcctctctcttcccatttctgcttctcagattgtgtca
tctctagttcaaattgttgtcaacatacaaccaacactgattcaatccagcaatggactg
catggagcttctaatagtggcgtgcaaggttcagttttaccaacatccccctcaggaggt
agtacagatagtgcaggcagatcaactccttcagtgtcagggatcaacacctctagtttt
gtttcccgaagtggttatacttgccaacagctttcatgcttatttatccaagcttgtggt
ttgttgttggcccaactccctcctgagtttcacttacaactttacatggaggcatcacga
ataattaaagaaagttggtggctaacagatgggaagagatcactgaacgaactagactct
gctgtttgctatgctttgctggatccgacatgggcttcccaagataatacctctacggcc
ataggtaatatagtcgcattgcttcattctttcttcaataatctcccccaagaatggcta
gagggaacacatgtcattattcaacatctccggccggtaacatcagttgccatgttgaga
atagcattccggataatgggccctttactaccacgacttgtcaatgctcacaatcttttc
aacaagattctgtcattactattgaatacactggtggatgtatttgggaaaaacattcaa
ccaccggtcccagttgaagcatcagaaatatcggatctcatcgactaccttcaccatatt
atccactatgaaggacaaggaggcccagtgcaagcaagcagcaagccaaggccggaggtg
ttggctatttgtgggagagctgctgaaagtctacgctccgacgtacaacatcttctatca
cacttgaaacccgacattaactcttcgatatatgctgctacgcatccgaagttggttcag
aatccatccacctga
DBGET
integrated database retrieval system
