Hibiscus syriacus (Rose-of-Sharon): 120179322
Help
Entry
120179322 CDS
T09559
Name
(RefSeq) protein CHROMATIN REMODELING 35-like isoform X1
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
120179322
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hsyr03400
]
120179322
DNA repair and recombination proteins [BR:
hsyr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
120179322
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
ERCC3_RAD25_C
DUF7078
Motif
Other DBs
NCBI-GeneID:
120179322
NCBI-ProteinID:
XP_039040882
LinkDB
All DBs
Position
Unknown
AA seq
750 aa
AA seq
DB search
MSNRSCLEENVSLTSEIDIKKDEDNKNPRPLHSSQEIVLNKPSSKEKTVGECMSNKSNPK
EYVGLTSETDLKKDEGVYLGVEDADTQSENGDDGLGDIWQEMSMALEISKDGFEDLSSER
MSDDEDCDHSFVLKDDIGYVCRICGVIDRGIETIIEVQFNKVKKSTRTYAVEGWNAKYRG
STETVGIKLSEGDLTVTDIAAHSRHMKQMKPHQLEGFNFLLSNLVSENPGGCILAHAPGS
GKTFMIINFMQSFLAKYPQAKPLVVLPKGILATWKKEFHTWQVEDIQLLDFYSVKAENRS
QQLEVLKQWVGNKSILLLGYKQFSTIICDGGNGQTSVSCQEILLKAPSILILDEGHTPRN
ENTDVLQSLAKVQTPRKVVLSGTIYQNHVKEVFNILNLVRPKFLRSDSSKLIMRRVMSKV
QIPGGRKQFKAGADAAFYDSVEHALQKDENFERKVSVIHDLREMTSKVLHYYKGDFLDEL
PGPIDFTVELGLSPRQMDEVQKLKRYQRRFKISSVGSSLYLHPRLGSFSEKCDTTDDNIN
DKMDDLLDKLDIKEGAKAKFFLNMLNLCESAGEKLLVFSQYLIPLNFLERLSVKMKGWHS
GTEIFSITGESSNEQRELYMDRFNNSPDARVFFGSIKACGEGISLVGASRIIILDVHLNP
SVTRQAIGRAFRPGQKKKVYSYRLIASDSPEEEDHATCFKKELIAKMWFEWNKYSGDQVF
DMESVNMNECNDLFLESPLLREDIKSLYKR
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atgagtaacagaagctgccttgaagaaaatgttagtctaaccagtgaaattgatataaag
aaggatgaagacaacaaaaatccaaggcctctgcactcttctcaggaaattgtattgaat
aagccttcctcgaaggagaaaacggttggggagtgtatgagtaataagagtaatccgaaa
gaatatgttggtctaaccagtgaaactgatctcaagaaggatgaaggtgtttatcttggt
gttgaagatgctgatactcaaagtgagaatggagatgatggtttaggagatatttggcag
gagatgtcaatggcattagagatttccaaggatggttttgaggatctttcaagtgaacgg
atgtcagatgatgaggattgcgaccattcttttgtattgaaggatgatattggttacgtg
tgtcgcatttgcggagttattgatagaggaattgagaccataattgaggtccagtttaac
aaggttaaaaagagtacacgcacttacgccgtagaaggatggaatgccaaatatagaggg
tcgactgaaactgttgggattaagttgtctgaaggtgatctaacagtaactgacatagct
gcacattcaagacatatgaagcaaatgaaacctcatcaattagagggctttaattttcta
ctgagcaatttggtatcagagaaccctgggggctgcatcctggcccatgcacctggatct
ggaaagacgtttatgataatcaacttcatgcaaagtttcctagccaaatatccacaagct
aaaccactagtagttcttccgaaaggtatcttggctacatggaaaaaggaattccatacg
tggcaagtagaggatattcaactgcttgatttttattctgtgaaagctgagaataggtct
cagcaattagaggtgctgaagcagtgggttgggaacaagagtatccttcttctggggtac
aaacagttttctaccataatttgtgatggtggaaacggccagacttccgtttcttgccag
gagatactgctcaaagcaccttcaattctaattttggatgaaggccacacaccaaggaat
gaaaataccgatgtgttacaatcccttgcgaaagttcaaacacctcgaaaagttgtactt
tcaggaactatctatcaaaatcatgtcaaagaggtatttaacatattgaatcttgttcgg
ccaaagtttctcaggtcagactcttcgaagttaataatgaggagggtaatgagcaaggta
caaatacctggtgggaggaaacagttcaaagccggagcagatgctgctttttatgattcg
gtggagcacgctttgcagaaggatgagaattttgagaggaaagtctcagtcatacatgat
ctacgtgagatgaccagcaaagttcttcattactacaaaggtgattttttggatgagctt
cctggacctattgatttcactgttgaacttggtcttagtcccagacagatggatgaagtt
cagaagctaaaaagatatcaaaggaggttcaagatttcatctgttggtagttctctttat
ttacatcctagactgggttctttctctgagaaatgcgacacgactgatgataatatcaat
gacaagatggatgatttgttagacaaattagatatcaaagaaggagccaaagcaaagttc
tttcttaatatgttaaatttatgtgaatcagccggtgagaagctccttgtttttagtcag
tatctaatccccttaaattttttagagagattatctgtgaaaatgaagggttggcattca
ggaactgagattttctcaatcactggtgaatcaagtaatgaacaaagggagttgtatatg
gatcgcttcaacaactctcccgatgctagagttttctttggatctatcaaggcttgtgga
gagggaatttctttggtcggggcatcacgaattataatcttggatgttcatcttaaccca
tccgtcacccgacaagccataggccgtgcatttcgacctggacaaaagaagaaagtgtat
tcctatagactgatagcaagtgattctcctgaagaggaggatcatgctacttgtttcaag
aaggaattaatcgcaaagatgtggtttgagtggaacaagtattctggtgaccaagtgttt
gatatggaaagtgttaacatgaatgagtgcaatgatctgtttttggaaagtccattgtta
agagaagatattaagtctctgtacaaaaggtag
DBGET
integrated database retrieval system
