Hibiscus syriacus (Rose-of-Sharon): 120179424
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Entry
120179424 CDS
T09559
Name
(RefSeq) cyclic nucleotide-gated ion channel 4-like isoform X1
KO
K05391
cyclic nucleotide gated channel, plant
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
120179424
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
hsyr04040
]
120179424
Ion channels [BR:
hsyr04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
120179424
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
cNMP_binding
Ion_trans
Motif
Other DBs
NCBI-GeneID:
120179424
NCBI-ProteinID:
XP_039040955
LinkDB
All DBs
Position
Unknown
AA seq
701 aa
AA seq
DB search
MASEREISFSRGAHAPYFTDDDDDDEEEKLGDTEEEELLEDEVEEEEEEESWRDSRGLFL
MCGGSGRRRKIWSLGRVLDPRAKWVQEWNRVFLLVCATGLFMDPLFFYTLSVSDTCMCLF
VDGWFAITVTALRCMTDALHVWNMCLQLKMVKRSSYDKRSGSESEEERDGRRERSSRPRG
ANARHVAFKYLKATKGFFFDLFVILPLPQIVLWVAIPSLLERGSVTLVMTVLLIIFLFQY
LPKIYHAVCLLRRMQNLSGYVFGTVWWGIALNLIAYFVASHAAGACWYLLGIQRSAKCLK
EQCRGIENCDLRLLTCKDPIYYGTRSMVRDGARLLWAENKQVRSACIETPANYDYGAYKW
TVQLVKNDSRLEKILFPIFWGLMTLSTFGNLESTTEWLEVVFNIIVLTSGLLLVTMLIGN
IKVFLHATTSKKQAMQLKMRNIEWWMRKRRLPSGFRQRVRNYERQRWAAMRGVDECEMIR
NLPEGLRRDIKYHLCLDLVRQVPLFQHMDDLVLENICDRVKSLIFTKGEIITREGDPVQR
MLFVVRGHLQSSQILRDGVKSYCMLGPGNFSGDELLSWCLRRPFIERLPPSSSTLITLET
TEAFGLEADDVKYVTQHFRYTFVNEKVKRSARYYSPGWRTWGAVAIQLAWRRYKHRLTLT
SLSFIRPRRPLSRSNSLGEERLRLYTAMLTSPKPNQDDFDF
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcgaacgggaaatttccttttcgcgtggcgctcatgcgccgtattttactgac
gacgacgatgacgacgaggaagagaagttgggagatacggaagaagaagaattgttggag
gatgaggttgaggaggaagaagaagaagagagttggagggatagtcggggattgttttta
atgtgtggcggcagcggccgtcggcgtaaaatttggtcgctagggcgagttttggaccct
agagctaaatgggttcaggaatggaatagggttttcctcctcgtgtgcgcaacgggcctc
ttcatggacccgttgttcttctacaccctctcggtaagcgacacgtgcatgtgcctgttc
gtcgacgggtggttcgccatcaccgtgacggcgctccggtgcatgaccgacgcgttgcac
gtgtggaacatgtgcctgcagctcaaaatggtcaagcgatcgtcgtacgataagagaagc
ggaagcgagagtgaagaggagagagacgggaggcgagaaagaagcagccgaccccgtggt
gcgaatgcacgccacgtggcatttaaataccttaaagcaacaaaaggattcttcttcgat
ctcttcgtaatcctacccctacctcagattgtactgtgggtggcaattccatcattattg
gaaagaggatcggtaaccctagtaatgacggtgctgttgataatattcctcttccaatac
cttccgaagatctaccatgccgtttgcctcctacgacggatgcaaaacctttccggctac
gtctttggtaccgtctggtgggggattgctctcaatttgatcgcttatttcgtcgcttca
catgcagcgggagcttgctggtacttgttggggatccaaagatcggccaagtgcctgaaa
gagcaatgtagaggaatagagaattgtgacctgaggttattgacttgcaaagatccaatt
tactatggaacaagaagcatggtgagggatggagctaggctactttgggcagaaaacaaa
caagtgagaagcgcatgcattgaaacccctgctaactatgattacggagcttataaatgg
accgttcagctcgtcaagaacgacagtcgtctcgagaaaatacttttccccatcttctgg
ggtctcatgactctcagcacatttgggaacttggagagcacaaccgaatggctggaagtt
gttttcaacatcattgtgcttaccagtggacttcttctcgtcacaatgttgatcggaaac
attaaggtgtttctgcatgcaacaacgtccaagaaacaagcgatgcagttgaagatgagg
aatatagagtggtggatgaggaagaggcgcttgccttccgggttccggcaaagggtccgc
aactacgagcggcaacggtgggctgcgatgcgcggtgtcgacgaatgtgagatgatccga
aacttacccgaggggctccggagagatatcaagtaccacctctgcctggatttagttagg
caggtaccattgtttcaacacatggatgatttggtcttagaaaatatttgtgatcgtgtc
aaatctttaattttcaccaaaggagaaattataactagagaaggtgatccggtacaaaga
atgctgtttgtggtaaggggacatctccaaagcagccaaattcttagagatggtgtgaaa
agttactgcatgttaggccccggaaatttcagtggcgatgagctcttatcgtggtgtcta
cgaagacccttcattgaaaggctcccgccatcgtcttccacactcataacactcgaaact
accgaggcattcggtcttgaagccgacgatgtcaaatatgttacgcaacatttccgctat
acattcgttaatgaaaaggtcaagaggagtgctcggtattattctccggggtggcgtaca
tggggagcggtggcgattcaattggcttggaggcggtataagcaccggctaaccctcaca
tcattgtcgttcattcggcctcggaggccattatctaggagtaattcattgggggaggag
aggctcaggctttatacagctatgttgacttcaccaaagcccaatcaagatgattttgat
ttttga
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