Hibiscus syriacus (Rose-of-Sharon): 120179689
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Entry
120179689 CDS
T09559
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 20-like
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120179689
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hsyr03041
]
120179689
03009 Ribosome biogenesis [BR:
hsyr03009
]
120179689
Enzymes [BR:
hsyr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
120179689
Spliceosome [BR:
hsyr03041
]
Complex A
U1 snRNP components
U1 related factors
120179689
Complex B
120179689
Ribosome biogenesis [BR:
hsyr03009
]
Eukaryotic type
Pre-60S particles
Helicases
120179689
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
120179689
NCBI-ProteinID:
XP_039041153
LinkDB
All DBs
Position
Unknown
AA seq
505 aa
AA seq
DB search
MSRYDSRSGDPSSYRDRRSGSGFGGASAYGGSVRPLSSRRDYDAAEPPRKLDLDGLTPFE
KNFYVESPSVAAMSETEVEEYRKRREITVEGRDVPKPVKSFADVGFPDYVLQEITKAGFV
EPTAIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILAPGDGPIVLVLAP
TRELAVQIQQEAAKFGASSRIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLDSH
HTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQIRPDRQTLYWSATWPKEVEQLSRQFLY
NPYKVIIGSADLKANHAIRQHVDIISESQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQI
TRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGLDVKDVKYVINYD
FPGSLEDYVHRIGRTGRAGAKGTAYSFFTAANARFAKDLIVILKEAGQKVSPELAAMGRG
APPPPSGYGGFRDRGKGYGGSRPWN
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgttatgatagccgctccggcgatccctcctcctaccgtgaccgcagaagtggc
tcagggtttggtggggcttcagcatacggtggttcggtgcggcccttgtccagcagaagg
gactatgatgctgctgaaccacctaggaagttggatttggatggtttgactcctttcgaa
aagaatttttatgttgaatccccttcggtggcagcaatgtcagagacagaggtggaggaa
tataggaagcggagagaaattacagttgaaggtcgtgatgttccaaagcctgtgaagagt
tttgcagatgtgggatttccggactatgtgttgcaagagattacaaaagcagggtttgtt
gaaccaacagccatccaatctcaaggctggccaatggctttgaagggccgtgatctcatt
ggcattgctgaaactggatcggggaagacacttgcctatttattgcctgcaattgttcat
gtaaacgcacagccaattttagctcctggagatggtccaattgtattagtattagctcca
acacgtgaacttgcggttcagatacagcaagaggctgctaagtttggagcatcatcaagg
attaaaaatacatgcatatatggcggggttccaaagggacctcaagtgcgtgatctccag
aaaggtgttgagattgttatcgctacaccaggaaggttgatagatatgttggactcgcat
catacaaatttgcgaagagttacttatttagtcttggatgaggcagatcggatgttagat
atggggtttgaccctcagatacgaaaaattgtttctcagatccgtcctgatcgtcaaact
ttatactggagtgcaacatggccaaaggaggttgaacaattgtcaaggcagtttctttac
aatccatacaaagttataattggatctgcggatttaaaagctaaccatgcgattcgtcaa
catgttgacattatttcggagagtcagaaatataacaaactagtgaagctgctggaggat
atcatggatggcagcagaattttgattttcatggataccaagaaaggttgtgaccaaatc
accaggcaacttcgcatggatggttggcctgctctctcgattcatggagataaaagtcaa
gctgaaagggattgggtcctttcagagtttaaagctggcaagagccctataatgactgca
acagatgtggcagctcgtggcttagatgtgaaagacgtgaaatatgtaatcaattatgac
ttcccgggatctcttgaggattacgtccatcgaattggtcgaacaggaagggcaggggca
aaaggaactgcctacagtttcttcactgctgcaaatgccagattcgcaaaagaccttatt
gtcatacttaaggaagctggacaaaaggtcagtcctgaattggcagcgatgggacgtgga
gcacctcctcctccatcaggttatggtggtttccgagaccgaggtaagggctatggtggc
agccgcccttggaactga
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integrated database retrieval system
