Hibiscus syriacus (Rose-of-Sharon): 120179923
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Entry
120179923 CDS
T09559
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr00040
Pentose and glucuronate interconversions
hsyr01100
Metabolic pathways
Module
hsyr_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
120179923
Enzymes [BR:
hsyr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
120179923
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Paralog
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
120179923
NCBI-ProteinID:
XP_039041304
LinkDB
All DBs
Position
Unknown
AA seq
465 aa
AA seq
DB search
MMFLKTLCLPLLFTLISLRSCFGIDSYTEDPFHVDFRRGRAYRRPISYRPYVRTFGHVPN
IRNYRNPYSVNRFDHNSGIRARLDRARGPMTSKMVNVDDFGAKANGRDDSLAFKKAWNYA
CSSSQGATMVVPKKKTYHVKPINFSGPCKSPLVLKIYGTIKATTDHSEYEGNGRRWLYFD
NVENLRVEGGGTINGNGRTWWEKSCKINKALPCKEAPTAVTFNECTNLRVSSLRIKNAQQ
MHLIFRECVNVNAFNLRVKAPGNSPNTDGIHVTGTQNININNCVIGTGDDCISIVSGSKN
VRATGITCGPGHGISIGSLGAGNSAAYVSNVIVNKATFRDTTNGVRIKTWQGGSGYAKNI
RFQNIVMNNVSNPIIIDQNYCDKRKPCRKQVSAVQVSDVLYQNIRGTSATGVAVKFDCSQ
SVPCRRIYLQDVALRAEEEDSAQASCANVRLSYRGDVSPPCSSQN
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgatgttcctaaaaactctctgtctcccacttctgtttacattaatctctttgcgttcc
tgcttcggcatcgacagttacacagaggacccatttcacgtcgattttcgtcgtggccga
gcttatcgccgcccgatatcctatcgtccgtatgttcgcaccttcggtcatgttcccaac
atacgaaactaccgtaatccctactcggtgaaccggttcgaccacaatagcggaatccga
gcgagacttgacagagcacgtggtccgatgacttcgaagatggtcaatgtcgatgatttc
ggggctaaagctaatggaagagatgattctttggcatttaagaaagcttggaactatgct
tgttcttcatctcaaggagctactatggtggtccctaagaagaagacttatcatgttaag
ccaattaacttctcaggaccttgcaaatctcctcttgtattgaagatctatggaacaatc
aaagccactacagatcactccgaatacgaaggtaatggaagacggtggctttacttcgat
aacgttgaaaatttacgagtcgaaggtggcggcaccatcaatggcaatggcagaacatgg
tgggaaaagtcctgcaaaatcaacaaagccctcccttgcaaggaagcgccaactgctgta
acgttcaatgaatgcactaacctgagagtgtcaagtctgcggataaaaaacgcacagcaa
atgcatcttatttttcgagaatgtgtgaacgttaatgcgtttaatcttcgggtgaaagca
cccggtaacagtcccaacaccgacggaattcacgtgaccggaacccagaatattaacatt
aacaattgtgtcatcgggacgggagatgattgcatctcaatcgtgagcggctcgaaaaat
gtccgtgccacgggtataacttgtggaccgggccatggaatcagcattgggagcctagga
gcaggaaactctgctgcttatgtgtccaatgtcatagttaataaagcaacatttcgggac
accactaacggagtgagaataaagacatggcagggcggatcaggatatgctaagaacatc
aggtttcaaaacattgtgatgaacaacgtcagtaaccctatcatcatcgatcaaaattat
tgtgataaacgaaaaccatgccgcaaacaggtgtcagctgtgcaagtgagcgatgtgctt
taccagaacatcaggggaacgagtgcgacgggagtggccgtgaaattcgactgcagccag
agcgttccttgtcggcggatttacctgcaggacgtggctttaagggctgaagaggaagac
agtgcacaagcttcatgcgctaatgttcgattatcttatcgaggagatgtttccccgcct
tgctcgtcacaaaattaa
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