Hibiscus syriacus (Rose-of-Sharon): 120180046
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Entry
120180046 CDS
T09559
Name
(RefSeq) WD-40 repeat-containing protein MSI4-like
KO
K10752
histone-binding protein RBBP4
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr03082
ATP-dependent chromatin remodeling
hsyr03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
120180046
03083 Polycomb repressive complex
120180046
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hsyr03036
]
120180046
Chromosome and associated proteins [BR:
hsyr03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
120180046
Histone modification proteins
HAT complexes
HATB complex
120180046
HDAC complexes
Sin3A-HDAC complex
120180046
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
120180046
PRC2.2
120180046
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
120180046
Heterochromatin formation proteins
Other heterochromatin formation proteins
120180046
Chromatin remodeling factors
NuRD complex
120180046
NuRF complex
120180046
NuRF complex (fruit fly)
120180046
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_WDR5
WD40
Beta-prop_IFT122_1st
CAF1C_H4-bd
WD40_CDC20-Fz
Beta-prop_WDR3_1st
WD40_Prp19
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_RIG_2nd
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
WD40_Gbeta
WDR55
Beta-prop_EML
Beta-prop_Aladin
DSE1_N
EIF3I
Beta-prop_DCAF12
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_1st
DNAI3_WD
WD40_RFWD3
Beta-prop_WDR90_POC16_2nd
eIF2A
Beta-prop_HPS5
Beta-prop_SPT8
Beta-prop_WDR35_TULP_N
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
120180046
NCBI-ProteinID:
XP_039041408
LinkDB
All DBs
Position
Unknown
AA seq
488 aa
AA seq
DB search
MESSQPQQQQQQGPKKRGRKPKPKDEKDQQQQSAGKTKEGKKSQQPSVDEKYTQWKSLVP
VLYDWLANHNLVWPSLSCRWGPQLEQATYKSRQRLYLSEQTDGSVPNTLVIANCEVVKPR
VAAAEHISQFNEEARSPFVKKYKTLIHPGEVNRIRELPQNSKIVATHTDSPDVLIWDVEA
QPNRHAVLGATHSRPDLILTGHQDNAEFALAMCPTEPYVISGGKDKSVVLWSIQDHISGG
SIIKQNKPGEGNDKAAEGPSVGPRGIFCGHEDTVEDVAFSPSSAQEFCSVGDDSCLILWD
ARVATNPAVKVEKAHDADLHCVDWNRHDDNLILTGSADTTVCLFDRRNLTSNGVGSPIYK
FEGHKAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYDKVGKKVDRPSKSSSTAGLFFQHAG
HRDKVVDFHWNASDPWTIVSVSDDCDTTGGGGTLQIWRMSDLIYRPEEEVLAELEKFKSH
VISCAGKT
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atggagtcttcccaaccccaacaacagcagcaacaaggacccaagaagagaggccgaaaa
ccgaagccaaaagacgagaaagatcagcagcaacaaagtgctggtaaaacgaaagaagga
aagaaatcccaacaaccaagcgttgatgagaagtacactcaatggaagtctttggtccct
gttctctacgactggcttgctaatcacaatctcgtttggccttctctctcttgccgctgg
gggccacagcttgagcaagctacttacaagagtcgacagcgtctctacctctctgagcag
actgatggtagcgttccaaatactcttgtgattgcaaattgtgaagttgttaagcctagg
gttgctgctgccgagcacatctctcagtttaatgaagaagcacgctcacctttcgtgaag
aagtacaagaccctcatacatcccggagaggttaataggatcagagaacttccacagaac
tcgaagattgttgctacacacactgatagtccagatgttcttatttgggatgttgaagct
caacccaaccggcatgcggttcttggagctacacattctcgcccggatttgattttgact
ggacatcaagataatgctgaatttgctcttgcaatgtgtcctactgaaccctatgtgatc
tctggagggaaggacaaatcagtggttttgtggagcatccaggaccacatatctggtgga
tcgatcatcaaacagaacaagcctggggaaggtaatgataaagcagccgaagggccttct
gtaggtcctcgtggaatcttctgtgggcatgaggatacagttgaagatgtcgcgttctcc
ccatccagtgcacaagagttttgtagtgtaggtgacgattcctgcctcatattatgggat
gcacgagttgccactaaccctgctgtcaaggttgaaaaggcacatgatgctgatcttcat
tgtgttgattggaaccgccatgatgataatcttatcctaaccgggtctgcagatactact
gtttgtttgtttgatcgaagaaatctcacttctaatggagttggatcaccaatttataag
tttgagggacataaagctgctgttctatgtgttcagtggtctccggacaagtcatctgta
tttggtagttctgctgaggatggcctcttaaacatttgggactatgacaaggttggcaaa
aaggtggatcgtccttcaaagtctagttctacggcaggactttttttccagcatgctggc
cacagggacaaagttgttgatttccattggaatgcatctgatccgtggaccattgtaagt
gtttctgacgactgtgacaccaccggtggaggagggacattacagatatggcgcatgagt
gatctgatctacaggccagaggaggaggtcttggcggagctcgagaaattcaagtcccat
gtcatttcatgtgccggtaaaacatga
DBGET
integrated database retrieval system
