Hibiscus syriacus (Rose-of-Sharon): 120180490
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Entry
120180490 CDS
T09559
Name
(RefSeq) U-box domain-containing protein 13-like
KO
K27628
U-box domain-containing protein 12/13/14 [EC:
2.3.2.27
]
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
120180490
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hsyr04121
]
120180490
Enzymes [BR:
hsyr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120180490
Ubiquitin system [BR:
hsyr04121
]
Ubiquitin ligases (E3)
U-box type E3
120180490
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Arm
U-box
ARM_ARMC5
HEAT_2
zf-RING_UBOX
Neurochondrin
HEAT_EZ
zf-C3HC4_4
zf-Nse
KAP
Arm_2
zf-C3HC4_2
MLKL_N
zf-C3HC4
MCAfunc
zf-rbx1
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
120180490
NCBI-ProteinID:
XP_039041738
LinkDB
All DBs
Position
Unknown
AA seq
665 aa
AA seq
DB search
MEEEKGELVQSLIDAVNQIAPIGDYRCAVKKEFCNLSRRLKLLTPMFEEIGESKEQIPEE
IVKELVSLKEALISAKELLRLGREGSKIYLVLERDQIMRKFHEVTARVEQALSGITYEDL
DISDEVKEQVELVLAQFRRAKGRVDAADVELYEYLLSLYNKSSDAAADPDGLRRLVEKLQ
LVGVAELTQESLALHEMVSASGGDSGETFEKMSNLLNKIKDFVQTENPNLDAFAREKNLP
PSSSGQVTTDGDHKTPVIPDDFRCPISLELMKDPVIVSTGQTYERSCIEKWLEQGHGTCP
KTQQTLSSCALTPNYVLRSLIAQWCEANGIEPPKRPSSSQPNKTTSACSPAERTKIEILL
RKLASCSPEDQRMAAGEIRLLAKRNADNRVAIAEAGAIPLLVALLSTPDSRTQEHAVTAL
LNLSICEDNKGSIMSFGAVPGIVQVLKKGSMEARENAAAALFSLSVVDENKVTIGASGAI
PLLVTLLSEGTQRGKKDAATALFNLCIYQGNKGKAVRAGVVPTLMRLLTEPGGGMVDEAL
AILAILSSHPEGKSGIGAAEAVPVLVDVIGNGSPRNKENAAAVLVHLCAGDQQHLAEAQE
LGVMGPLLDLAQNGTDRGKRKAAQLLERMSRFIEQQKLGQAQAEAHAQSETQHPQPPSVA
YAIDR
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atggaagaagagaaaggagagcttgtgcagagcttgatcgatgcggtgaaccaaatagct
cctatcggagattacagatgtgccgtgaagaaggagttttgcaatctctctaggagactg
aagctgctaacgccaatgttcgaggagattggagagagcaaagagcaaatccctgaagaa
attgttaaagagttggtctcgttgaaagaagctttgatttcggctaaggagttgctcaga
ctcggcagagaaggaagcaagatttacctggttttagagagagatcagattatgcgtaaa
tttcatgaagtgacagctcgggtggagcaagctttgagtggaattacctatgaggatctt
gacatatcagatgaagttaaggaacaggtggagcttgttctagctcagttcaggagagct
aaaggaagggttgacgccgcagatgttgaactatatgagtatctattatcactctacaat
aagagtagtgatgcagcagcagatccagatggactaaggagattagttgagaagttacaa
ttggtcggggtagctgaacttacgcaagaatcactagctctacatgagatggtttctgcc
agtggtggagattctggggaaacatttgagaagatgtcaaacttattaaataaaatcaag
gattttgtacagaccgaaaaccctaatttggatgcttttgcgagggaaaagaatcttcct
cctagtagtagtggtcaagtgaccactgatggagatcacaagactccagttataccggat
gatttccgctgtccaatatccttggagttgatgaaggatcctgtcattgtttcaacaggg
cagacatatgaacgttcttgtattgagaaatggctggaacaaggtcacggaacttgtcca
aagacgcaacagaccctcagtagctgtgccctcacgcccaattatgtactgcgtagtcta
atagctcaatggtgcgaggcaaatggcattgaaccacccaaaagacccagtagttctcaa
cccaataaaaccacatctgcctgctcacctgcagagcgtaccaagattgaaattcttctc
cgtaagcttgcatcctgtagtcctgaagaccaaagaatggctgcgggtgaaatccgtctt
cttgccaaacgaaatgcagataaccgtgtggccattgctgaagctggggccatacctctc
cttgtggccctcctttcaacacctgattcacggacccaagaacatgctgtaacagcactt
cttaacctttccatttgtgaagataacaaaggaagtatcatgtcctttggagcagttccc
ggtatagtgcaggtacttaagaagggtagcatggaagctagagagaatgcagcagctgct
ctcttcagcctttcagtagtggatgaaaataaggtgacaattggtgcctcgggagcaatt
cctctgttagtgacactgctaagcgaaggcacacaaaggggcaaaaaagatgcagctaca
gctctcttcaatttgtgcatttaccaagggaacaagggaaaagcagtgagagccggagtt
gtgccaactttaatgcgtttgttgacagaacctggaggtggaatggttgatgaggcattg
gccatacttgcaatactctctagccatccagagggtaagtctggcataggagcagcagag
gcagtgccagttttggtagatgttatcggtaatggatctccaaggaataaagagaatgca
gctgcagttttggttcacctctgtgccggagaccaacaacatttagcagaggcccaggaa
ctaggagtgatgggtcctttgttggacttggcacaaaatggtacagataggggcaagcgg
aaggctgctcaattgctagagcgtatgagcaggttcattgagcagcaaaagctggggcag
gcgcaagctgaggcccatgctcagtctgagactcaacatccacagccaccctctgtggca
tatgccattgatagatga
DBGET
integrated database retrieval system
