Hibiscus syriacus (Rose-of-Sharon): 120180681
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Entry
120180681 CDS
T09559
Name
(RefSeq) transcription initiation factor TFIID subunit 4b-like isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
120180681
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hsyr03021
]
120180681
03036 Chromosome and associated proteins [BR:
hsyr03036
]
120180681
Transcription machinery [BR:
hsyr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
120180681
Coactivators
SAGA/TFTC/STAGA complex
120180681
Chromosome and associated proteins [BR:
hsyr03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
120180681
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF4
RST
SPMIP10-like
ParG
Motif
Other DBs
NCBI-GeneID:
120180681
NCBI-ProteinID:
XP_039041893
LinkDB
All DBs
Position
Unknown
AA seq
936 aa
AA seq
DB search
MDPSIVKLLEEDEDDSMHSGAAVEAFQTALNRDIEGDASTSQHSGSSTAAVSQGSNPASG
QSVAQWPTLGQDGNTNFQNQQVLRSVQQQHQISSETEQKQQGSVNAGSQQQLQQPNDVQQ
EHNRLPLQQKQLQGDNQQGVAEQIPAQVSQTTRIQTTEKSPTPREPERTNNQDSESQYAK
LQKTSNQPASGAEQPNNPMNRGKQVPFAVLLPALVPQLDKDRAMQLHTLYGKLKKNEIAK
DGFVRHMRDIVGDQMLRLAVNKLQAQISSNQFPLQSHTGARPTALRMPSVGGATQLASPH
SLSQLHQKGPNSPANSTQAPSPAVPMQANSSYLSGENKAKKSQELDCQSDSRFGMVGSQI
SSSGSTTANQERGRSSIPTQGINKQQQQPLNFPQNSFGMYGSNNYHTYSGPNVNTSASTL
KLQPHDSQMRQIAHHQSMGPNPVGGSTQAMNMMSGPKLERQNSSNDPNRLQGASLSHFSG
GSVPWQASPSKELNPGPLSSAAYVKQESVDQGADQYRPHLSATQGVSTTLVEQGNAVITT
PRDEPGEKQSSRVGFSTPSITAQMDSNMGSRNTSVPAPAGVNARTPQKKSSIGQKKPLEG
LGSSPAPSSKKQKVSAAFSDQSIEQLNDVTAVSGVNLREEEEQLLSGPKDESRVSEASRR
VVQEEEERLFLKKTPLQKKLAEIMAKSGLKNISNDVERCLSLSVEERMRGLICNLIRLSK
QRVDVEKPRHRTQITSDVRQQIMMMNQNARGEWEKKQAEAEKLQKLNEPEAETAVDGDKE
KDDSRAKVVKVNKEEDDKMRTTAANVAARAAVGGDDMLSKWQLMAEQARQKREGGTDAAS
GSQVGKDVNNRPPSASGKSTKYNQEFEKTGPLSPHASGGSKKFGRNQGVMLTPHTGVART
ISVKDVIAVLEREPQMSKSTLIYSLYEKACSESKAG
NT seq
2811 nt
NT seq
+upstream
nt +downstream
nt
atggacccttccatagtaaagctccttgaagaagacgaggacgattctatgcattctgga
gctgccgttgaggctttccagaccgcattgaatcgagatattgaaggcgatgcgtcgact
tctcagcactcgggttcaagtactgcagctgtctctcaaggaagcaatcctgcttctggt
cagtcagttgcacaatggccaaccctggggcaagatgggaacaccaacttccaaaatcaa
caagtccttcgaagtgttcagcagcaacatcagatttcatccgagactgagcaaaagcaa
cagggatctgtaaatgccgggagtcagcaacaattacaacagccaaatgatgttcagcag
gagcataatcgtctaccactgcaacaaaaacaactccaaggtgataatcagcaaggagta
gctgaacaaattcctgctcaggtttctcaaacgactaggattcagactactgaaaaaagt
cctaccccacgtgaacctgagagaaccaataatcaagacagtgaatcacaatatgctaaa
ttacagaagacgagtaatcaaccggccagtggagcagagcagccaaataatcccatgaat
cgaggaaaacaagttccatttgctgtgttgttgcctgccttagtgccccaactcgataaa
gacagagccatgcagcttcatactctgtatgggaaactaaagaaaaatgaaattgcaaaa
gacggatttgtcaggcacatgagagatattgtaggagaccagatgctgcggttggcagtt
aacaagttacaagcgcagataagttccaatcagttcccactacagtcccatactggagca
cgaccgactgctctccggatgccatctgttggtggtgccacacagcttgctagtccacat
tcattatctcagctgcaccaaaagggtcctaattctcctgccaattcaactcaggcccca
tccccagcagtccccatgcaggctaattcaagttatttatctggtgaaaacaaggctaaa
aaatctcaagagctggattgccaatcagattctcgctttggaatggtgggtagccaaatt
tcttcctccggttcaaccactgcaaatcaagaaagaggacgttcatcaattccgacacaa
ggaattaacaagcaacagcaacaacctttgaatttcccacaaaattcatttggcatgtac
gggagtaataattatcacacatattctgggccaaatgttaatacttcagcttccactcta
aagctgcaacctcatgattcacaaatgaggcaaattgcacatcatcaaagcatgggaccg
aatcctgttggaggatcaacccaggctatgaacatgatgagtgggcctaagcttgagagg
caaaactctagtaatgacccaaatagattgcagggtgcatctctttctcacttttcaggt
ggttcagttccttggcaagcctccccaagtaaggagctgaatcctggtcctttgtcatca
gcagcatatgtgaaacaggaatctgttgatcaaggtgctgaccagtatagacctcatttg
tctgccacccagggagtgtcgactacactagttgaacaaggaaatgcagttataactact
ccaagagatgagcctggagagaagcaatcttccagagttggcttctcaacaccttcaatc
acagcacaaatggattctaatatgggctctagaaatacatctgtgcctgctccagctggg
gtcaacgcaagaacccctcaaaaaaagtcttctattggacagaagaaaccattggaaggt
ctgggttcctcaccagcaccgtcaagcaagaagcaaaaagtgtctgcagcattttcagat
cagagcattgaacaactaaatgatgtcactgctgttagcggagtcaatctcagggaagaa
gaagagcaactattgtctggccccaaggatgagagtcgagtttcagaagcatctagaagg
gttgtgcaagaggaagaagaaaggctctttttgaagaaaacccctttgcagaagaaattg
gctgaaattatggccaaaagtggtttgaagaatataagcaatgatgtggaacgatgtttg
tccctgagtgtggaggaaagaatgcgggggctcatatgcaatttaatcagactgtcgaaa
cagcgtgttgatgttgagaagcctaggcatcggacacaaattacctcagatgtccggcag
caaattatgatgatgaaccagaatgccaggggagaatgggagaaaaagcaggctgaggcg
gagaagctccaaaaacttaatgaacccgaggctgagactgccgttgatggtgacaaggag
aaagatgacagtcgagcaaaagtagtaaaggtaaacaaggaggaggatgacaagatgagg
accactgctgcaaatgttgctgcacgtgcagctgttggaggggatgacatgctgtcaaaa
tggcaacttatggctgagcaagctcgccagaaacgtgaagggggaacggatgcagcatct
ggttcacaggtaggtaaagatgtgaacaacaggcctccatctgcatctggaaaaagtaca
aagtacaatcaagaatttgaaaaaacgggtccgctcagtcctcatgcatctgggggaagc
aagaaatttggccggaaccagggtgtgatgctcacgccccatactggagtggctcgtact
atttcggttaaggatgtgattgcagttctggaaagagagccccaaatgtccaagtccaca
cttatttatagcttgtacgaaaaagcctgctctgaatctaaagcggggtga
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